DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43155 and kcnc3a

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:XP_073797827.1 Gene:kcnc3a / 559096 ZFINID:ZDB-GENE-100901-1 Length:666 Species:Danio rerio


Alignment Length:423 Identity:87/423 - (20%)
Similarity:142/423 - (33%) Gaps:179/423 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DAAEGGGLAKGTAGGRRSTAC-------------WQSMKWKSAL----------------NHIGL 68
            |..|......|.|.|.....|             ||...|  ||                :.:.:
Zfish   156 DPPEDDPALTGGADGDLKRLCLQEDGRNPSRWSTWQPWVW--ALFEDPYSSKYARYVAFGSLLFI 218

  Fly    69 LVSLSIYCGVGGLIFRHLERPAEVERLSHLKDIVKTHRERFLHTILNNTE---VHNLD-ELLSFE 129
            |:|:|.:|                         ::|| |.| :||.|.||   |.|:. |.:.||
Zfish   219 LISISTFC-------------------------LETH-EAF-NTIYNKTENVTVGNVTREEVVFE 256

  Fly   130 LA--KYEAAVQQAAEGGLLIVADKDFPEPYERWSILQ-----------AVFFSSTVLTTIGYGNI 181
            :.  .:...|:     |:.:|           |..::           |.||.|: |..|.:..|
Zfish   257 VVTDNWLTYVE-----GVCVV-----------WFTIEVFTRVIFCPDKAEFFKSS-LNIIDFVAI 304

  Fly   182 VPVTTGGRVFCICFALIGIPFT--------LTVIADWGRLFATAVSVFGKHMPTKPKFT-NFIG- 236
            :|       |.:..||.|:...        |.|:.     |...:.:|        |.| :|:| 
Zfish   305 LP-------FYLEMALSGLSSKAAKDVLGFLRVVR-----FVRILRIF--------KLTRHFVGL 349

  Fly   237 ---------KTWFYAILAVGFLGVYLAAGAGLLLLWE------DD-----WTFFD----GFYFCF 277
                     .|..:.:|.: ||.:.:...|.::...|      ||     .|.|.    ||::..
Zfish   350 RVLGHTLRASTNEFLLLII-FLALGVLIFATMIYYAERIGADPDDPTASAHTAFKNIPIGFWWAV 413

  Fly   278 ITMTTIGFGDLVPKKPNYMLLCTLYILIGLALTSTIIELVRRQYATSWAKLQELSGPMAETLRRL 342
            :||||:|:||:.|:..:.||:..|..|.|:...:..:.::...:                     
Zfish   414 VTMTTLGYGDMYPETWSGMLVGALCALAGVLTIAMPVPVIVNNF--------------------- 457

  Fly   343 GETAGTGLDYTALQKVLTVSMPKWNSKKNEHSP 375
                  |:.|:     |.::..|...|||:|.|
Zfish   458 ------GMYYS-----LAMAKQKLPKKKNKHIP 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 17/89 (19%)
Ion_trans_2 <267..319 CDD:462301 17/55 (31%)
kcnc3aXP_073797827.1 None

Return to query results.
Submit another query.