DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43155 and KCNK1

DIOPT Version :9

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_002236.1 Gene:KCNK1 / 3775 HGNCID:6272 Length:336 Species:Homo sapiens


Alignment Length:357 Identity:97/357 - (27%)
Similarity:157/357 - (43%) Gaps:83/357 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LLVSLSIYCGVGGLIFRHLERPAEVERLSHLKDIVKTHRERFL--HTILNNTEVHNLDELLS--F 128
            |::...:|...|.::|..:|.|.|    ..|:..::..:.|||  |..|:..:   |::.|.  .
Human    26 LVLGYLLYLVFGAVVFSSVELPYE----DLLRQELRKLKRRFLEEHECLSEQQ---LEQFLGRVL 83

  Fly   129 ELAKYEAAVQQAAEGGLLIVADKDFPEPYERWSILQAVFFSSTVLTTIGYGNIVPVTTGGRVFCI 193
            |.:.|..:|...|.|..             .|....|:||:||||:|.|||:.||::.||:.|||
Human    84 EASNYGVSVLSNASGNW-------------NWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCI 135

  Fly   194 CFALIGIPFTLTVIADWGRLFATA-VSVFGKHMPTKPKFTNFIGKTW---------FYAILAVGF 248
            .:::|||||||        ||.|| |.....|:..:|..  :....|         .:|:| :||
Human   136 IYSVIGIPFTL--------LFLTAVVQRITVHVTRRPVL--YFHIRWGFSKQVVAIVHAVL-LGF 189

  Fly   249 LGV--YLAAGAGLLLLWEDDWTFFDGFYFCFITMTTIGFGDLVPK-------KPNYMLLCTLYIL 304
            :.|  :....|.:..:.||||.|.:.||||||:::|||.||.||.       :..|.:..|.|:|
Human   190 VTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLL 254

  Fly   305 IGLALTSTIIELVRRQYATSWAKLQELSGPMAETLRRLGETAGTGLDYTALQKVLTVSMPKWNSK 369
            :||.....::|        ::.:|.||.                     ..:|:..|...|...:
Human   255 LGLIAMLVVLE--------TFCELHELK---------------------KFRKMFYVKKDKDEDQ 290

  Fly   370 KNEHSPDIAALEAITNAILKEVKEAQNNKPKV 401
            .:....|..:..:||:......::.:.|:|.|
Human   291 VHIIEHDQLSFSSITDQAAGMKEDQKQNEPFV 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 <157..214 CDD:285168 26/56 (46%)
Ion_trans <240..314 CDD:278921 30/82 (37%)
Ion_trans_2 <266..319 CDD:285168 23/59 (39%)
KCNK1NP_002236.1 Ion_trans_2 <101..157 CDD:400301 31/63 (49%)
pore-forming domain 107..123 11/15 (73%)
Ion_trans_2 192..267 CDD:400301 27/82 (33%)
pore-forming domain 212..238 14/25 (56%)
Important for intracellular retention in recycling endosomes. /evidence=ECO:0000269|PubMed:19959478 293..299 1/5 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4331
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.