DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43155 and Kcnk5

DIOPT Version :9

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001034605.1 Gene:Kcnk5 / 364241 RGDID:1564985 Length:503 Species:Rattus norvegicus


Alignment Length:343 Identity:99/343 - (28%)
Similarity:148/343 - (43%) Gaps:78/343 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LLVSLSI-YCGVGGLIFRHLERPAEVERLSHLKDIVKTHRERFLHTI-----LNNTEVHNLDELL 126
            ||.|..| |..:|..||..||.|       |.|:..|.:..:.||.:     |:.   ..||::|
  Rat     7 LLTSAIIFYLAIGAAIFEVLEEP-------HWKEAKKNYYTQKLHLLKEFPCLSQ---EGLDKIL 61

  Fly   127 SFELAKYEAAVQQAAEGGLLIVADKDFPEPYERWSILQAVFFSSTVLTTIGYGNIVPVTTGGRVF 191
            .        .|..||:.|:.|..::.|    ..|:...|:.|::||:|||||||:.|.|..||:|
  Rat    62 Q--------VVSDAADQGVAITGNQTF----NNWNWPNAMIFAATVITTIGYGNVAPKTPAGRLF 114

  Fly   192 CICFALIGIPFTLTVIADWGRLFATAVSVFGKHMP------TKPKFTNFIGKTWFYAILAVGFLG 250
            |:.:.|.|:|..||.|:..|:.|.......|:.:.      .|.:.|       ..||..|..:.
  Rat   115 CVFYGLFGVPLCLTWISALGKFFGGRAKRLGQFLTRRGVSLRKAQIT-------CTAIFIVWGVL 172

  Fly   251 VYLAAGAGLLLLWEDDWTFFDGFYFCFITMTTIGFGDLVP---KKPNYMLL----CTLYILIGLA 308
            |:|.....:.::.| :|.:.:|.|:.|||::||||||.|.   ...||..|    ..|:|.:|||
  Rat   173 VHLVIPPFVFMVTE-EWNYIEGLYYSFITISTIGFGDFVAGVNPSANYHALYRYFVELWIYLGLA 236

  Fly   309 LTSTI--------------IELVRRQYATSWAKLQELSGPMAETLRRLGETAGTGLDYTALQKVL 359
            ..|..              |:..||:...|:    |.|....:.|:..|.||..           
  Rat   237 WLSLFVNWKVSMFVEVHKAIKKRRRRRKESF----ESSPHSRKALQMAGSTASK----------- 286

  Fly   360 TVSMPKWNSKKNEHSPDI 377
            .|::..:.|||.|...|:
  Rat   287 DVNIFSFLSKKEETYNDL 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 <157..214 CDD:285168 25/56 (45%)
Ion_trans <240..314 CDD:278921 28/94 (30%)
Ion_trans_2 <266..319 CDD:285168 23/73 (32%)
Kcnk5NP_001034605.1 Ion_trans_2 <81..137 CDD:285168 25/55 (45%)
Ion_trans_2 171..243 CDD:285168 25/72 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 1 1.000 - - otm44944
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.910

Return to query results.
Submit another query.