DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43155 and twk-48

DIOPT Version :9

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001022681.1 Gene:twk-48 / 3565640 WormBaseID:WBGene00010784 Length:372 Species:Caenorhabditis elegans


Alignment Length:348 Identity:84/348 - (24%)
Similarity:147/348 - (42%) Gaps:100/348 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NHIGLLVSLSIYCGVGGLIFRHLERPAEVERLSHLKDIVKTHRERFLHTILNNT-EVHNLD---- 123
            :||||...:..|..:|.:||:.:|.|.|.|    ::::||:.||:.:..:.|.| .|:.||    
 Worm    26 SHIGLCALVVGYALLGAVIFKAVEGPHEAE----IQELVKSAREKAVDVVWNATFRVNRLDSKQW 86

  Fly   124 -ELLSFELAKYEA----AVQQAAEGGLLIVADKDFPEPYERWSILQAVFFSSTVLTTIGYGNIVP 183
             :.:..|:.:::.    ::::..:|       |::.: ..:|:...|..:|.||:|||||||...
 Worm    87 KKTVLDEVKRFKTVCMLSIRKGYDG-------KEYGK-QAQWTFTGAFLYSLTVITTIGYGNTAA 143

  Fly   184 VTTGGRVFCICFALIGIPFTLTVIADWGR--------LFATAVSV-------FGKHMPTKPKFTN 233
            .|..|:...:.:|:||||..|..:.:.|.        |:|.::.:       ..|....|.:..|
 Worm   144 KTYIGKTLTMLYAIIGIPLMLLFLTNIGDVMAKIFRFLYAQSIRLKFRLILWHKKRKAAKIRRAN 208

  Fly   234 FI---------------------------------------------------GKTWFYAILAVG 247
            .:                                                   ..|...:::...
 Worm   209 SLVSRLTRGHRVKADSSVDSFGLGAGADVEDLLTARVEMEQLEVRETAAAQLESMTVPISLVVFT 273

  Fly   248 FLGVYLAAGAGLLLLWEDDWTFFDGFYFCFITMTTIGFGDLVP--------KKPNYMLLCTLYIL 304
            .|| ||..|..:..:|| .|||.:.||||||::|||||||..|        :....:::.::|:|
 Worm   274 MLG-YLGVGTTIFKVWE-GWTFLESFYFCFISLTTIGFGDKFPSTSVSNTDEAQEKLVITSIYLL 336

  Fly   305 IGLALTSTIIELVRR--QYATSW 325
            .|:||.:....|.:.  |..|.|
 Worm   337 FGMALLAMCFNLAQEEVQNKTRW 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 <157..214 CDD:285168 21/64 (33%)
Ion_trans <240..314 CDD:278921 29/81 (36%)
Ion_trans_2 <266..319 CDD:285168 23/60 (38%)
twk-48NP_001022681.1 Ion_trans_2 <117..176 CDD:285168 21/58 (36%)
Ion_trans_2 272..355 CDD:285168 30/84 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.