DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43155 and Kcnb1

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_037318.2 Gene:Kcnb1 / 25736 RGDID:2954 Length:857 Species:Rattus norvegicus


Alignment Length:234 Identity:60/234 - (25%)
Similarity:94/234 - (40%) Gaps:72/234 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 STELLEKLKHLDRRVDAAEGGGLAKGTAGGRRSTAC--WQSM-----------KW---KSALNHI 66
            |...|.:|:.||....:.:...||...|      .|  |.:|           ||   |..||.|
  Rat   207 SLNTLPELQSLDEFGQSTDNPQLAHVEA------VCIAWFTMEYLLRFLSSPKKWKFFKGPLNAI 265

  Fly    67 GLLVSLSIYCGV-------GGLIFRHLERPAEVERLSHLKDIVKTHRERFLHTILNNTEVHNLDE 124
            .||..|..|..:       ..|.|:::.|..::.|:..:..|:|..|        ::|.:.:   
  Rat   266 DLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLAR--------HSTGLQS--- 319

  Fly   125 LLSFELAK-YEAAVQQAAEGGLLIV---------------ADKDFPEPYERWSILQAVFFSSTV- 172
             |.|.|.: |.       |.||||:               |:||  |...::..:.|.|:.:|: 
  Rat   320 -LGFTLRRSYN-------ELGLLILFLAMGIMIFSSLVFFAEKD--EDDTKFKSIPASFWWATIT 374

  Fly   173 LTTIGYGNIVPVTTGGRVF----CICFAL-IGIPFTLTV 206
            :||:|||:|.|.|..|::.    ||...| |.:|..:.|
  Rat   375 MTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIV 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 26/85 (31%)
Ion_trans_2 <267..319 CDD:462301
Kcnb1NP_037318.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
BTB_POZ_KCNB2 15..141 CDD:349719
Self-association. /evidence=ECO:0000269|PubMed:18463252, ECO:0000269|PubMed:19690160 59..75
Ion_trans 188..424 CDD:459842 60/234 (26%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 377..382 3/4 (75%)
Self-association. /evidence=ECO:0000269|PubMed:18463252, ECO:0000269|PubMed:19690160 448..481
Kv2channel 467..678 CDD:397541
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 476..524
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 540..569
FFAT. /evidence=ECO:0000250|UniProtKB:Q14721 590..596
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 610..658
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 770..802
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 818..857
Blue background indicates that the domain is not in the aligned region.

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