DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43155 and Kcna1

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_775118.1 Gene:Kcna1 / 24520 RGDID:2949 Length:495 Species:Rattus norvegicus


Alignment Length:389 Identity:70/389 - (17%)
Similarity:134/389 - (34%) Gaps:127/389 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LLVSLSIYCGVGGLIFRHLERPAEVERLSHLKDIVKTHRERFLHTILNNTEVHNLDELLSFELAK 132
            :|:|:.|:|               :|.|..|||     .:.|..||      |.:|..       
  Rat   177 ILISIVIFC---------------LETLPELKD-----DKDFTGTI------HRIDNT------- 208

  Fly   133 YEAAVQQAAEGGLLIVADKDFPEPYERWSILQAVFFS-----------------STVLTTIGYGN 180
                        .:|.....|.:|:.....|..::||                 ..::..|....
  Rat   209 ------------TVIYTSNIFTDPFFIVETLCIIWFSFELVVRFFACPSKTDFFKNIMNFIDIVA 261

  Fly   181 IVP--VTTGGRVF----------CICFALIGIPFTLTVIADWGRLFATAVSVFGKHMPTKPKFTN 233
            |:|  :|.|..:.          ....|::.:...:.|.    |:|.     ..:|    .|...
  Rat   262 IIPYFITLGTEIAEQEGNQKGEQATSLAILRVIRLVRVF----RIFK-----LSRH----SKGLQ 313

  Fly   234 FIGKTWFYAILAVG------FLGVYLAAGAGLLLLWEDDWTFF----DGFYFCFITMTTIGFGDL 288
            .:|:|...::..:|      |:||.|.:.|......|:..:.|    |.|::..::|||:|:||:
  Rat   314 ILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEAEEAESHFSSIPDAFWWAVVSMTTVGYGDM 378

  Fly   289 VPKKPNYMLLCTLYILIGLALTSTIIELV---------RRQYATSWAKLQELSGPM----AETLR 340
            .|......::.:|..:.|:...:..:.::         |.......|:|..:|.|.    ::..|
  Rat   379 YPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQLLHVSSPNLASDSDLSR 443

  Fly   341 RLGETAGTGLDYTALQKVLTVSMPKWNSKKNEHSPDIAALEAITNAILKEVKEAQN--NKPKVL 402
            |...|.... :|..:::.:..|:..:. :.|..:.:..|.:             ||  ||.|:|
  Rat   444 RSSSTISKS-EYMEIEEDMNNSIAHYR-QANIRTGNCTATD-------------QNCVNKSKLL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 14/99 (14%)
Ion_trans_2 <267..319 CDD:462301 12/64 (19%)
Kcna1NP_775118.1 Tetramerization domain. /evidence=ECO:0000305 1..128
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
BTB_POZ 37..163 CDD:453885
Ion_trans 166..418 CDD:459842 52/298 (17%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 310..323 3/12 (25%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 372..377 2/4 (50%)
PDZ-binding. /evidence=ECO:0000305 493..495 70/389 (18%)
Blue background indicates that the domain is not in the aligned region.

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