DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43155 and shw-1

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001022089.1 Gene:shw-1 / 174331 WormBaseID:WBGene00008819 Length:619 Species:Caenorhabditis elegans


Alignment Length:352 Identity:62/352 - (17%)
Similarity:110/352 - (31%) Gaps:144/352 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 WQSMK----------WK-------SALNHIGLLVSLSIYCGVGGLIFRHLERPAEVERLSHLKDI 101
            ||.:|          |.       |.:|.|.:::|:..:|                         
 Worm   244 WQRLKPRVWALFDEPWSSKYARVISVVNIIFVIISIVCFC------------------------- 283

  Fly   102 VKTHRERFLHTI------------LNNTEVHNLDELLSFELAKYEAAVQQAAEGGLLIVADKDFP 154
            :|||....:..|            ||..:::|:          |.......|......|      
 Worm   284 LKTHPSFRIPDIDISTTMGNFSAPLNGVQMNNI----------YVGKTATRAHPSFFYV------ 332

  Fly   155 EPYERWSILQAVFFSSTVLTTIGYGNIVPVTTGGRVFCICFA--------LIGIPFTLTVIADWG 211
                  .:|..::||...||.:             |||...|        ||....|::...||.
 Worm   333 ------ELLSNIWFSGEFLTRM-------------VFCPNVATFLRTPVNLIDFIATVSFYIDWA 378

  Fly   212 ----------------------RLF-----ATAVSVFGKHMPTKPKFTNFIGKTWFYAILAVGFL 249
                                  |||     :|.:.:..:.....       .:..|..:..| .|
 Worm   379 LDRTLSGSNRDSVEFFSIIRILRLFKLTQHSTGLKILIQTFKAS-------AQELFLLVFFV-LL 435

  Fly   250 GVYLAAGAGLLLLW--------EDDWTFFD-GFYFCFITMTTIGFGDLVPKKPNYMLLCTLYILI 305
            |:.:.|.   |:.:        |:.::... |.::..||:.|||||||||:.....|:.::..|:
 Worm   436 GIVIFAA---LVYYAERVEHNEENQFSSIPVGLWWAVITICTIGFGDLVPQTSLGRLVGSVCALM 497

  Fly   306 GLALTSTIIELVRRQYATSWAKLQELS 332
            |:...:..:.::...:|..::..|..|
 Worm   498 GVLTIALPVPVIVSNFAMFYSHAQARS 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 16/100 (16%)
Ion_trans_2 <267..319 CDD:462301 15/52 (29%)
shw-1NP_001022089.1 BTB_Shaw-like 100..211 CDD:349723
Ion_trans 264..521 CDD:459842 56/327 (17%)
Blue background indicates that the domain is not in the aligned region.

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