DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43155 and Kcna6

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_038596.1 Gene:Kcna6 / 16494 MGIID:96663 Length:529 Species:Mus musculus


Alignment Length:228 Identity:51/228 - (22%)
Similarity:81/228 - (35%) Gaps:77/228 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GGLAKG------TAGGR-----------------------RSTAC-WQSMKWKSALNHIGLLVSL 72
            |||..|      |.||.                       |.:|| .::..:::.:|.|.|:...
Mouse   241 GGLGTGGTSSLSTLGGSFFTDPFFLVETLCIVWFTFELLVRFSACPSKAAFFRNIMNIIDLVAIF 305

  Fly    73 SIYCGVG-GLIFRHLERPA-----------------EVERLSHLKDIVKTHRERFLHTILNNTEV 119
            ..:..:| .|:.||.::..                 .|.||..:..|.|..|......||..|..
Mouse   306 PYFITLGTELVQRHEQQSVSGGSGQNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGKTLQ 370

  Fly   120 HNLDEL-----------LSFELAKYEAAVQQAAEGGLLIVADKDFPEPYERWSILQAVFFSSTVL 173
            .::.||           :.|..|.|.|....         .|..||      ||..|.:::...:
Mouse   371 ASMRELGLLIFFLFIGVILFSSAVYFAEADD---------VDSLFP------SIPDAFWWAVVTM 420

  Fly   174 TTIGYGNIVPVTTGGRVFCICFALIGIPFTLTV 206
            ||:|||::.|:|.||::.....|:.|:   ||:
Mouse   421 TTVGYGDMYPMTVGGKIVGSLCAIAGV---LTI 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 19/64 (30%)
Ion_trans_2 <267..319 CDD:462301
Kcna6NP_038596.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35
BTB_POZ_KCNA6 41..170 CDD:349714
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..238
Ion_trans 259..468 CDD:459842 44/210 (21%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 360..373 3/12 (25%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 422..427 3/4 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 488..513
PDZ-binding. /evidence=ECO:0000255 527..529
Blue background indicates that the domain is not in the aligned region.

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