DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43155 and Kcna2

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_032443.3 Gene:Kcna2 / 16490 MGIID:96659 Length:499 Species:Mus musculus


Alignment Length:227 Identity:49/227 - (21%)
Similarity:84/227 - (37%) Gaps:78/227 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GGGL-----AKGTAGGRRSTA-----------C--WQSMK--------------WKSALNHIGLL 69
            |||:     :..|.|.::||:           |  |.|.:              :.:.:|.|.::
Mouse   197 GGGVTFHTYSNSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIV 261

  Fly    70 VSLSIYCGVGGLIFRHLERPAEVE--------------RLSHLKDIVKTHRERFLHTILNNTEVH 120
            ..:..:..:|..:   .|:|.:.:              ||..:..|.|..|......||..|...
Mouse   262 AIIPYFITLGTEL---AEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKA 323

  Fly   121 NLDEL-----------LSFELAKYEAAVQQAAEGGLLIVADKDFPEPYERWSILQAVFFSSTVLT 174
            ::.||           :.|..|.|.|...:         .|..||      ||..|.:::...:|
Mouse   324 SMRELGLLIFFLFIGVILFSSAVYFAEADE---------RDSQFP------SIPDAFWWAVVSMT 373

  Fly   175 TIGYGNIVPVTTGGRVFCICFALIGIPFTLTV 206
            |:|||::||.|.||::.....|:.|:   ||:
Mouse   374 TVGYGDMVPTTIGGKIVGSLCAIAGV---LTI 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 20/64 (31%)
Ion_trans_2 <267..319 CDD:462301
Kcna2NP_032443.3 Tetramerization domain. /evidence=ECO:0000250|UniProtKB:P63142 1..125
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
BTB_POZ 33..159 CDD:453885
Ion_trans 162..420 CDD:459842 49/227 (22%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 312..325 3/12 (25%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 374..379 3/4 (75%)
PDZ-binding. /evidence=ECO:0000250|UniProtKB:P63142 497..499
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.