DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43155 and Kcna1

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_034725.3 Gene:Kcna1 / 16485 MGIID:96654 Length:495 Species:Mus musculus


Alignment Length:348 Identity:62/348 - (17%)
Similarity:120/348 - (34%) Gaps:111/348 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LLVSLSIYCGVGGLIFRHLERPAEVERLSHLKDIVKTHRERFLHTILNNTEVHNLDELLSFELAK 132
            :|:|:.|:|               :|.|..|||     .:.|..||      |.:|..       
Mouse   177 ILISIVIFC---------------LETLPELKD-----DKDFTGTI------HRIDNT------- 208

  Fly   133 YEAAVQQAAEGGLLIVADKDFPEPYERWSILQAVFFS-----------------STVLTTIGYGN 180
                        .:|.....|.:|:.....|..::||                 ..::..|....
Mouse   209 ------------TVIYTSNIFTDPFFIVETLCIIWFSFELVVRFFACPSKTDFFKNIMNFIDIVA 261

  Fly   181 IVP--VTTGGRVF----------CICFALIGIPFTLTVIADWGRLFATAVSVFGKHMPTKPKFTN 233
            |:|  :|.|..:.          ....|::.:...:.|.    |:|.     ..:|    .|...
Mouse   262 IIPYFITLGTEIAEQEGNQKGEQATSLAILRVIRLVRVF----RIFK-----LSRH----SKGLQ 313

  Fly   234 FIGKTWFYAILAVG------FLGVYLAAGAGLLLLWEDDWTFF----DGFYFCFITMTTIGFGDL 288
            .:|:|...::..:|      |:||.|.:.|......|:..:.|    |.|::..::|||:|:||:
Mouse   314 ILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEAEEAESHFSSIPDAFWWAVVSMTTVGYGDM 378

  Fly   289 VPKKPNYMLLCTLYILIGLALTSTIIELV---------RRQYATSWAKLQELSGPM----AETLR 340
            .|......::.:|..:.|:...:..:.::         |.......|:|..:|.|.    ::..|
Mouse   379 YPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQLLHVSSPNLASDSDLSR 443

  Fly   341 RLGETAGTGLDYTALQKVLTVSM 363
            |...|.... :|..:::.:..|:
Mouse   444 RSSSTISKS-EYMEIEEDMNNSI 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 14/99 (14%)
Ion_trans_2 <267..319 CDD:462301 12/64 (19%)
Kcna1NP_034725.3 Tetramerization domain. /evidence=ECO:0000250|UniProtKB:P10499 1..128
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
BTB_POZ 37..163 CDD:453885
Ion_trans 166..418 CDD:459842 52/298 (17%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 310..323 3/12 (25%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 372..377 2/4 (50%)
PDZ-binding. /evidence=ECO:0000250 493..495
Blue background indicates that the domain is not in the aligned region.

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