DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43155 and kcna4

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:XP_004913509.1 Gene:kcna4 / 100495646 XenbaseID:XB-GENE-492827 Length:688 Species:Xenopus tropicalis


Alignment Length:387 Identity:73/387 - (18%)
Similarity:129/387 - (33%) Gaps:145/387 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKEYDSQDEASTELLEK---LKHLDRRV-------------DAAEGGGLAKGTAGGRRSTACWQS 56
            ||.|:..:||..:..|.   :|..::::             :..|..|.|:|.|           
 Frog   273 VKFYELGEEALLKYREDEGFVKEEEKQLPENEFKKQVWLLFEYPESSGPARGIA----------- 326

  Fly    57 MKWKSALNHIGLLVSLSIYCGVGGLIFRHLERPAEVERLSHLKDIVKTHRERFLHTILNNTEVHN 121
                 .::.:.:|:|:.|:|               :|.|...:|                    :
 Frog   327 -----IVSVLVILISIVIFC---------------LETLPEFRD--------------------D 351

  Fly   122 LDELLSFELAKYEAAVQQAAEGG-----LLIVADKDFPEPYERWSILQAVFFS------------ 169
            .|.||| .|...:....:..|||     .|:.....|.:|:.....:..|:||            
 Frog   352 KDSLLS-PLGMGDDGTGEDGEGGAYNATFLLTDHTAFNDPFFIVETVCIVWFSFEFAVRLFACPS 415

  Fly   170 ------------------------STVL----------TTIGYGNIVPVTTGGRVFCICFALIGI 200
                                    .|.|          ..:|.|..:|..||.:...:.||::.|
 Frog   416 KPGFFKDIMNIIDIVSILPYFITLGTELGQQHPPQQQHLALGTGQQLPQGTGQQQQAMSFAILRI 480

  Fly   201 PFTLTVIADWGRLFATAVSVFGKHMPTKPKFTNFIGKTWFYAILAVG------FLGVYLAAGAGL 259
            ...:.|.    |:|.     ..:|    .|....:|.|...::..:|      |:||.|.:.|..
 Frog   481 IRLVRVF----RIFK-----LSRH----SKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVY 532

  Fly   260 LLLWEDDWTFF----DGFYFCFITMTTIGFGDLVPKKPNYML---LCTLYILIGLALTSTII 314
            ....::..|.|    |.|::..:||||:|:||:.|......:   ||.:..::.:||...:|
 Frog   533 FAEADEPTTHFHSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVI 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 20/121 (17%)
Ion_trans_2 <267..319 CDD:462301 17/55 (31%)
kcna4XP_004913509.1 K_channel_TID 1..83 CDD:429748
BTB_POZ 193..319 CDD:453885 8/45 (18%)
Ion_trans 322..605 CDD:459842 64/338 (19%)
Blue background indicates that the domain is not in the aligned region.

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