DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43155 and kcna6

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:XP_004912861.1 Gene:kcna6 / 100492986 XenbaseID:XB-GENE-1010669 Length:481 Species:Xenopus tropicalis


Alignment Length:246 Identity:52/246 - (21%)
Similarity:93/246 - (37%) Gaps:61/246 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 ILNNTEVHNLDELLSFELAKYEAAVQ---QAAEGGLLIVADKDFPEPYERWSILQAVFFS----- 169
            ||.:..:..|:.|..|.    |.|.|   |.|..|.....:..|.:|:.....|..::||     
 Frog   175 ILISIVIFCLETLPEFR----EEARQSGGQPAVNGTHTFTNSPFTDPFFLTETLCIIWFSFELLV 235

  Fly   170 ------------STVLTTIGYGNIVP--VTTGGRVF---------CICFALIGIPFTLTVIADWG 211
                        ..::..|....|:|  :|.|..:.         .:..|::.:...:.|.    
 Frog   236 RFFACPSKPAFFKNMMNVIDIVAIIPYFITLGTELAEQQGSNGQQAMSLAILRVIRLVRVF---- 296

  Fly   212 RLFATAVSVFGKHMPTKPKFTNFIGKTWFYAILAVG------FLGVYLAAGAGLLLLWEDDWTFF 270
            |:|.     ..:|    .|....:|||...::..:|      |:||.|.:.|......:|..:.|
 Frog   297 RIFK-----LSRH----SKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAETDDPESLF 352

  Fly   271 ----DGFYFCFITMTTIGFGDLVPKKPNYML---LCTLYILIGLALTSTII 314
                |.|::..::|||:|:||:.|......:   ||.:..::.:||...:|
 Frog   353 TSIPDAFWWAVVSMTTVGYGDMYPMTIGGKIVGSLCAIAGVLTIALPVPVI 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 14/98 (14%)
Ion_trans_2 <267..319 CDD:462301 15/55 (27%)
kcna6XP_004912861.1 BTB_POZ 35..161 CDD:453885
Ion_trans 206..414 CDD:459842 41/211 (19%)
Blue background indicates that the domain is not in the aligned region.

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