DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43155 and kcnc1b

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001182126.2 Gene:kcnc1b / 100334453 ZFINID:ZDB-GENE-080414-3 Length:598 Species:Danio rerio


Alignment Length:393 Identity:84/393 - (21%)
Similarity:137/393 - (34%) Gaps:154/393 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VDAAEGG-------GLAKGTAGGRRS--TACWQS--------------MKWKSALNHIGLLVSLS 73
            |:||||.       .||:|.:...||  .:.||.              .:|.:..:...:|||::
Zfish   140 VEAAEGDEGVEMTRRLAQGDSPDNRSGRWSRWQKKAWALFEDPYSSKYARWVAFASLFFILVSIT 204

  Fly    74 IYCGVGGLIFRHLERPAEVERLSHLKDIVKTHRERFLHTILNNTEVHNLDELLSFELAKYEAAVQ 138
            .:|                         ::|| |.| :.|:|.||.:                  
Zfish   205 TFC-------------------------LETH-EAF-NPIINRTETY------------------ 224

  Fly   139 QAAEGGLLIVADKDFPEPYERWSILQAVFFSSTVLTTIGYGNIVPVTTGGRVFC----------- 192
              .||...:  ::.|||..   :::|..:.....:....:..|:.|||     |           
Zfish   225 --MEGNETV--ERIFPETE---TMVQLTYIEGVCVVWFTFEFIIRVTT-----CPDKLKFLRNTL 277

  Fly   193 --ICFALIGIPFTLTVIADWGRLFATAVSVFGKHMPTKPKFTNFIGKTWFYAILAV-----GFLG 250
              |.|..| :||.|.|... |.....|..|.|           |:....|..||.:     .|:|
Zfish   278 NIIDFVAI-LPFYLEVGLS-GLSSKAAKDVLG-----------FLRVVRFVRILRIFKLTRHFVG 329

  Fly   251 -------------------VYLAAG----AGLLLLWE------------DDWTFFD---GFYFCF 277
                               ::||.|    |.::...|            .|..|.:   ||::..
Zfish   330 LRVLGHTLRASTNEFILLIIFLALGVLIFATMIYYAERIGRNPNDPDASSDTHFKNIPIGFWWAV 394

  Fly   278 ITMTTIGFGDLVPKKPNYML---LCTLYILIGLAL-TSTIIELVRRQYATSWAKLQELSGPMAET 338
            :||||:|:||:.|:..:.||   ||.|..::.:|: ...|:......|:.:.|| |:|.....:.
Zfish   395 VTMTTLGYGDMYPQTTSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAK-QKLPKKKNKH 458

  Fly   339 LRR 341
            :||
Zfish   459 IRR 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 18/83 (22%)
Ion_trans_2 <267..319 CDD:462301 18/58 (31%)
kcnc1bNP_001182126.2 None

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