DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43155 and kcnd3

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001096411.1 Gene:kcnd3 / 100125015 XenbaseID:XB-GENE-5867971 Length:653 Species:Xenopus tropicalis


Alignment Length:158 Identity:33/158 - (20%)
Similarity:59/158 - (37%) Gaps:57/158 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 FYFCFITMTTIGFGDLVPKK---PNYMLLCTLYILIGLALTSTII-----------ELVRRQYAT 323
            |::..:||||:|:||:|||.   ..:..:|:|..::.:||...:|           :...::.|.
 Frog   358 FWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQ 422

  Fly   324 SWAKLQEL----------------SGPMAETLRRLGET------------------------AGT 348
            ..|:|..:                :|.:.|.|..:|.|                        ..|
 Frog   423 KKARLARIRVAKTGSSTAYLHSKRNGLLNEALELMGSTEEPHIGKSASLIESQHHHLLHCLEKTT 487

  Fly   349 GLDYTALQKVLTVSMPKWNSKKNEHSPD 376
            ||.|.....:|:|   :.::.||....|
 Frog   488 GLSYLVDDPLLSV---RTSTMKNHEFMD 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301
Ion_trans_2 <267..319 CDD:462301 16/59 (27%)
kcnd3NP_001096411.1 BTB_POZ_KCND3 6..143 CDD:349726
Ion_trans 186..412 CDD:459842 16/53 (30%)
DUF3399 468..563 CDD:463381 9/48 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.