DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sk1 and Cerkl

DIOPT Version :9

Sequence 1:NP_572717.1 Gene:Sk1 / 32089 FlyBaseID:FBgn0030300 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001041641.1 Gene:Cerkl / 228094 MGIID:3037816 Length:525 Species:Mus musculus


Alignment Length:376 Identity:95/376 - (25%)
Similarity:153/376 - (40%) Gaps:72/376 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KIQVKLCPEGVYLRRETEEDDHINEQLIRIDDIIGSRYGRRLKKRARGGLNSCRNPNVPGQEADS 119
            :||.:| |.|     .|..|....|:.:.::||    :..:||:|...                .
Mouse    56 RIQPEL-PAG-----GTRHDLLSKEESLELEDI----FSVKLKRRCWA----------------K 94

  Fly   120 EPDSDNSAYLYIYAYLKKEKPLRRVQTLRILRFRSSNDYGVNLQTAEMWHHTIRKHKRGNGSSSP 184
            .|..|....:.::..||:::...:..||.::.|  |.|:      .::|....:|...| .:|.|
Mouse    95 HPGRDTLLGITLFICLKEQRNKLKDSTLDLINF--SEDH------CDIWFRQFKKILDG-FTSRP 150

  Fly   185 ADCGKQLLILLNPKSGSGKGRELFQKQVAPLLTEAEVQYDLQITTHPQYAKEFVRTRRDLLTRYS 249
                |.|.|||||:|...:...::.::|.|||..|.::.|:.||.:..:|...:....  |..:.
Mouse   151 ----KALKILLNPQSHRKESVHVYYEKVEPLLKLAGIETDVTITEYEGHALSLLDECE--LRGFD 209

  Fly   250 GIVVASGDGLFYEVLNGLMER--------MDWRRAC------RELPLGIIPCGSGNGLAKSVAHH 300
            |:|...|||...|....|:.|        ||    |      .|||||.||.||.|.||.|:   
Mouse   210 GVVCVGGDGSASEAARALLLRAQKNAGVEMD----CIPTLVGAELPLGFIPAGSTNALAHSL--- 267

  Fly   301 CNEPYEPKPILHATLTCMAGKSTPMDVVRVELATRDKHFVMYSFLSVGWGLIADIDIESERLRSI 365
                :....::.||:..:.|....:||.....|.:...|...:....|...:|    .:|:.|.:
Mouse   268 ----FGTPHVVTATMHIILGHIRSVDVCTFSSAGKLLCFGFSAMFGFGGRTLA----LAEKYRWM 324

  Fly   366 G-AQRFTLWAIKRLIGLRSYKGRVSYLLGKGKKEPPVEAARELPAESTAAG 415
            . :||.....||.|..|:....::|:||. |..:...|...:..|||...|
Mouse   325 SPSQRRDFAIIKALAKLKPEDCKISFLLA-GCSQNKQERKSQRSAESDCGG 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sk1NP_572717.1 PLN02958 <189..622 CDD:215517 68/242 (28%)
DAGK_cat 191..330 CDD:279163 46/152 (30%)
CerklNP_001041641.1 PLN02204 113..513 CDD:215126 78/293 (27%)
LCB5 154..510 CDD:224513 66/239 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836238
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1597
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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