DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sk1 and F52C9.3

DIOPT Version :9

Sequence 1:NP_572717.1 Gene:Sk1 / 32089 FlyBaseID:FBgn0030300 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_498138.2 Gene:F52C9.3 / 175732 WormBaseID:WBGene00018674 Length:439 Species:Caenorhabditis elegans


Alignment Length:338 Identity:79/338 - (23%)
Similarity:122/338 - (36%) Gaps:79/338 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 FRSSNDYGVNLQTAEMWHHTIRKHKRGNGSSSPADCGKQLLILLNPKSGSGKGRELFQKQVAPLL 216
            :|...:.|:..:.|::      ..|.|..:.||....|::.:|:|.:..|....:.|.|...||.
 Worm    37 YRWDRNQGIRKEYAKI------AVKYGETTVSPETRPKRVFVLVNVEGNSRGCFDQFNKNALPLF 95

  Fly   217 TEAEVQYDLQITTHPQYAKEFVRTRRDLLTRYSGIV-VASGDGLFYEVLNGLMERMDWRRACREL 280
            ..|.||.|: :....|...|.:....|  |:.:.|: |..|||....|:.|:..    .|...:|
 Worm    96 HLAGVQVDV-VKADNQAQLEALAGAVD--TQEADILYVVGGDGTIGTVVTGIFR----NREKAQL 153

  Fly   281 PLGIIPCGSGN----GLAKSVAHHCNEPYEPKPILHATLTCMAG-KSTPMDVVRVELATRDKHFV 340
            |:|..|.|..|    .:..||..:.::      :.||..|.||. :.....|...||.|..    
 Worm   154 PVGFYPGGYDNLWLKRMLPSVFENSDD------VRHACETAMAVIEDQKKSVYAFELTTEG---- 208

  Fly   341 MYSFLSVGWGLIADIDIESERLRSIGAQRFTLWAIKRLIGLRSYKGRVSYLLGKGKKEP-PVEAA 404
              |.|:..:||   .|:.:...|.|...|...|.....      |.|.:|.....|:.| |:|..
 Worm   209 --STLAPEYGL---GDVSAGWFRQIEDTRKKFWYFSMA------KRRWAYFWEMLKRGPAPIECH 262

  Fly   405 RELPAESTAAGIRSSLP---------------------------------LN--AGEFHDLPEEE 434
            .|.  |.|.||.....|                                 :|  .||.|:| :..
 Worm   263 VEY--EETCAGCEKCRPKPIIEAPQWRWWHVLTGTPKYKNNDGQKDYTGIINEKCGEKHEL-DTH 324

  Fly   435 EGEAVLDGEQFAD 447
            ..|.:::.||.:|
 Worm   325 GAEFLIENEQMSD 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sk1NP_572717.1 PLN02958 <189..622 CDD:215517 72/301 (24%)
DAGK_cat 191..330 CDD:279163 37/144 (26%)
F52C9.3NP_498138.2 DAGK_cat 69..>161 CDD:279163 27/98 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1597
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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