DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sk1 and cerk-1

DIOPT Version :9

Sequence 1:NP_572717.1 Gene:Sk1 / 32089 FlyBaseID:FBgn0030300 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_491977.1 Gene:cerk-1 / 172423 WormBaseID:WBGene00020398 Length:549 Species:Caenorhabditis elegans


Alignment Length:586 Identity:121/586 - (20%)
Similarity:214/586 - (36%) Gaps:183/586 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 RIDDIIGSR-YGRRLKKRARGGLNSCRNPNVPGQEADSEPDSDNSAYLYIYAYLKKEKPLRRVQT 146
            |:|:::.:. |..::|...         |.:|     ::|.:.:....:.:.| ||:|...|::.
 Worm    86 RLDELLSTTCYPFKIKNGV---------PIIP-----TKPTTSDKTLYFNFVY-KKDKQKWRLKQ 135

  Fly   147 LRILRFRSS-NDYGVNLQTAEMWHH----TIRKHKRGNGSSSPADCGKQLLILLNPKSGSGKGRE 206
            :.::.:.:| .||         ||.    |:|:.|     :.|    |.::|.:||..|:||.::
 Worm   136 IPVIFYTTSERDY---------WHSLIDTTLRRVK-----NRP----KNIIIFINPFGGNGKAQK 182

  Fly   207 LFQKQVAPL--LTEAEVQYDLQITTHPQYAKEF-VRTRRDLLTRYSGIVVASGDGLFYEVLNG-- 266
            :|:..|...  ||.. ::|.:.:|....:|::: |....:..:...|:|...|||||.|:|:|  
 Worm   183 IFKDNVDAFFWLTPG-LRYKVVLTERANHARDYIVEMPPEQWSAIDGLVSVGGDGLFNELLSGAL 246

  Fly   267 LMERMDWRR---------ACRELPLGIIPCGSGNGLAKSVAHHCNEPYEPKPILHAT--LTCMAG 320
            |..:.|..|         ....:..|||..||.|.:..:| |..|:        |||  :....|
 Worm   247 LRTQTDAGRNIDNPSSHLVTPHIRFGIIGAGSANSIVSTV-HETND--------HATSAVHIAIG 302

  Fly   321 KSTPMDVVRVELATRDKHFVMYSFLSVGWGLIADIDIESERLRSIGAQRFTLWAIKRLIGLRSYK 385
            ....:||..|.   :.:..:..|..::.:|.:.|:..:||..|.:|..|:...|::..|....|:
 Worm   303 SECNVDVCTVH---QHQKLIRISANAISYGWLGDVLRDSEEYRCLGPIRYQWSALRTTIRHPIYR 364

  Fly   386 GRVSYLLGKGKKEPPVEAARELPAESTAAGIRSSLPLNAGEFHDLPEEEEGEAVLDGEQFADAIS 450
            |.|.:.|...:...|.:                          .||...|...|....|..|.  
 Worm   365 GMVQFSLSHKENVNPKD--------------------------QLPPCLEPCPVCMKPQGNDK-- 401

  Fly   451 LDRSVYRQHADSWHSAMSRRTAYYSLGGPSMRSNRSRMSISQRIEAANAEFAE----RVPTGTIP 511
                 |..|   ||                                  |||..    .:||.|  
 Worm   402 -----YDYH---WH----------------------------------AEFTHVICCVIPTVT-- 422

  Fly   512 PLQMPLLSSDGWICEDGDFVMVHAAYTTHLSSDVFFAPESRLDDGLIYLVIIRRGVSRHQLLNFM 576
                                    .:|.:     ..||.:.:.||.:.|.::.| :||...:.||
 Worm   423 ------------------------PFTPY-----GLAPFTGIGDGTLDLALVPR-ISRFHNMQFM 457

  Fly   577 --LNLNAGTHLPIGEDPFIKVVPCRAFRIEPSSSD---GILVVDGERVEY---GPIQAEVMPGLI 633
              :.:..|..| ...||.:.......:..:|.:..   |:..:|||.:|.   .|:..::.|.||
 Worm   458 RKVAMYGGKQL-YELDPSLNCYRVTKWSYQPDADQEDPGVWNLDGEILEQPKDEPLHFKLHPQLI 521

  Fly   634 N 634
            :
 Worm   522 S 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sk1NP_572717.1 PLN02958 <189..622 CDD:215517 96/460 (21%)
DAGK_cat 191..330 CDD:279163 42/154 (27%)
cerk-1NP_491977.1 PLN02204 <149..505 CDD:215126 101/480 (21%)
LCB5 165..525 CDD:224513 100/474 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1597
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D681139at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R653
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

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