DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gs2 and lgsn

DIOPT Version :10

Sequence 1:NP_001285121.1 Gene:Gs2 / 32087 FlyBaseID:FBgn0001145 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001026844.2 Gene:lgsn / 567024 ZFINID:ZDB-GENE-060312-26 Length:668 Species:Danio rerio


Alignment Length:202 Identity:39/202 - (19%)
Similarity:78/202 - (38%) Gaps:33/202 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 IPQSPKEL---PVWN-YDGSSCYQAEGSNSDTYLYP------VAIYKDPFRRGNNILVMCDTYKF 114
            :|:|..||   |..| .|.:|   |...:||..|.|      :..:.|...|     ::||....
Zfish   283 MPRSYLELTLSPQINEVDHAS---AVNFSSDVLLVPDLSTFQILPWADQTAR-----LICDPCTI 339

  Fly   115 DGTPTDTNKRKTCLEVANKCAAEEPWFGIEQEYTFLDFDGHPLGWPKNGFPGPQGPYYCGV---- 175
            .|.|..|:.|.....:..:  .:...|.:...:|   ::....|.|::  .||:..::...    
Zfish   340 TGVPLRTSPRLIAKMMLGQ--LQSMGFSLHSSFT---YECCIFGSPEH--VGPKAVFFPATTLLS 397

  Fly   176 GANKVYARDIVDAHYRACLYAGIKVSGTNAEVMPAQWEFQVGPCEGISIGDDLWMARFLLHRISE 240
            ..::.:.:.:|...|.    .|:.|...::...|.|.|....|..|:...|:.:..|..:..::.
Zfish   398 NNDQPFLQQLVKGMYN----MGVDVESFSSANGPGQMEICFKPRFGMDAADNAYTFRTGIKEMAR 458

  Fly   241 EFGIVST 247
            ::..::|
Zfish   459 KYDYIAT 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gs2NP_001285121.1 PLN02284 27..372 CDD:177922 39/202 (19%)
lgsnNP_001026844.2 GlnA 235..653 CDD:439944 39/202 (19%)

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