DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gs2 and Lgsn

DIOPT Version :10

Sequence 1:NP_001285121.1 Gene:Gs2 / 32087 FlyBaseID:FBgn0001145 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_017451925.1 Gene:Lgsn / 316304 RGDID:727925 Length:565 Species:Rattus norvegicus


Alignment Length:385 Identity:72/385 - (18%)
Similarity:142/385 - (36%) Gaps:103/385 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LDRYLSLP---LQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSSCYQAEGSN 84
            :.|..|:|   .||.::...::           ....|:.:| :||:..| |:..::|:     |
  Rat   154 VSRSKSIPAQFFQEKVIHGVFM-----------PRGYLELMP-NPKDNEV-NHIRATCF-----N 200

  Fly    85 SDTYLYPVAIYKDPFR----RGNNILVMCDTYKFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQ 145
            ||..|.|..   ..||    ......|:|||:...|.|..|:.|........:  .::..|.:..
  Rat   201 SDIVLMPEL---STFRVLPWAERTARVICDTFTVTGEPLLTSPRYIAKRQLRQ--LQDAGFSLLS 260

  Fly   146 EYTFLDF---------DGHPLGWPKNGFPGPQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVS 201
            .:.: ||         :...:.:|.:....         ..::.:.:::||..|    :.|..|.
  Rat   261 AFIY-DFCIFGVPEVINSKTISFPASTLLS---------NHDQPFMQELVDGLY----HTGANVE 311

  Fly   202 GTNAEVMPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMPGDWN-GAGAHT- 264
            ..::...|.|.|....|..|||..|:.:..|..:..::..:..:::|..:  .|..| |..:|: 
  Rat   312 SFSSSTRPGQMEICFLPEFGISSADNAFTLRTGVQEVARRYNYIASLVIE--TGFCNSGILSHSI 374

  Fly   265 -NVS--TKAMREDGGIRDI----EKAVAKLSK--------------CHERHIRAYDPKQGQDNAR 308
             :||  |.......|:..:    :|.:|.|.|              |.:|:.:  |.:..:|:..
  Rat   375 WDVSGKTNMFYSGSGVERLTLTGKKWLAGLLKHSAALSCLMAPAVNCRKRYCK--DSRDLKDSVP 437

  Fly   309 RLTGKHETSSINDFSAGVANRGCSIRI----PRGVNDDGKGYFEDRRPSSNCDPYSVVEA 364
            ...|.::.|             |::.:    .:|..      .|::..|:..:||.|:.|
  Rat   438 TTWGYNDNS-------------CALNVKCHGEKGTQ------IENKLGSATANPYLVLAA 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gs2NP_001285121.1 PLN02284 27..372 CDD:177922 71/381 (19%)
LgsnXP_017451925.1 Gln-synt_N 142..227 CDD:427610 20/93 (22%)
Gln-synt_C 239..563 CDD:425473 46/279 (16%)

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