DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlg1 and Pals2

DIOPT Version :9

Sequence 1:NP_001162718.1 Gene:dlg1 / 32083 FlyBaseID:FBgn0001624 Length:1030 Species:Drosophila melanogaster
Sequence 2:NP_001158205.1 Gene:Pals2 / 56524 MGIID:1927340 Length:553 Species:Mus musculus


Alignment Length:430 Identity:101/430 - (23%)
Similarity:151/430 - (35%) Gaps:126/430 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   591 IPGDNG------IYVTKLMDG----GAAQVDGRLSIGDKLIAVRTNGSEKNLENVTHELA-VATL 644
            :|...|      |::..:|:.    ..|:...||. ..||.||    |:.|||.|...|. :..|
Mouse    11 LPSSTGAEEIDLIFLKGIMENPIVKSLAKAHERLE-DSKLEAV----SDNNLELVNEILEDITPL 70

  Fly   645 KSITDKVTLIIG--KTQHLTTSASGGGGGGLSSGQQLSQSQSQLATSQSQSQVHQQQHATPMVNS 707
            .|:.:.|..::|  |..|.               |.|.::...:|:....|.....:...|.:|:
Mouse    71 ISVDENVAELVGILKEPHF---------------QSLLEAHDIVASKCYDSPPSSPEMNIPSLNN 120

  Fly   708 QSTEPGSRYASTNVLAAVPPGTPRAVSTEDITREPRTITIQKGPQGLGFNIVGGEDGQGIYVSFI 772
            |......|....:..|..|.|....|...|:.                             ::.|
Mouse   121 QLPVDAIRILGIHKKAGEPLGVTFRVENNDLV-----------------------------IARI 156

  Fly   773 LAGGPADLGSELKRGDQLLSVNNVNLTHATHE------EAAQALKTSGGVVTL--LAQYR----P 825
            |.||..|....|..||.:..||.       ||      |..:.||...|.|||  |..||    |
Mouse   157 LHGGMIDRQGLLHVGDIIKEVNG-------HEVGNNPKELQELLKNISGSVTLKILPSYRDTITP 214

  Fly   826 EE-YNRFEARIQELKQQAALGAGGSGTLLRTTQKRSLYVRALFDYDPNRDDGLPSR--GLPFKHG 887
            :: |...|.....::|                    ::|:..|||:|..|:.:|.:  ||.|..|
Mouse   215 QQSYVNMERHPAHVRQ--------------------VFVKCHFDYNPFNDNLIPCKEAGLKFSKG 259

  Fly   888 DILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKRRWERK----MRARDRSVKFQGHAAANNNLD 948
            :||.:.|..|..||||..|   .|....|::||:...|::    .|..|.|..|.|         
Mouse   260 EILQIVNREDPNWWQASHV---KEGGSAGLIPSQFLEEKRKAFVRRDWDNSGPFCG--------- 312

  Fly   949 KQSTLDRKKKN---FTFSRKFPFMKSRDEKNEDGSDQEPF 985
               |:..|||.   :..:|...|.:...:..|:.:...||
Mouse   313 ---TISNKKKKKMMYLTTRNAEFDRHEIQIYEEVAKMPPF 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlg1NP_001162718.1 L27_1 303..359 CDD:286187
PDZ 454..540 CDD:214570
PDZ_signaling 566..655 CDD:238492 20/74 (27%)
PDZ_signaling 742..820 CDD:238492 19/85 (22%)
SH3_DLG-like 862..922 CDD:212795 24/61 (39%)
Pals2NP_001158205.1 L27 2..55 CDD:197794 12/48 (25%)
L27 57..108 CDD:397114 14/65 (22%)
PDZ_signaling 132..205 CDD:238492 24/108 (22%)
SH3_MPP6 232..292 CDD:212971 24/62 (39%)
Guanylate_kin 350..540 CDD:395500 101/430 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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