DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlg1 and pals2b

DIOPT Version :9

Sequence 1:NP_001162718.1 Gene:dlg1 / 32083 FlyBaseID:FBgn0001624 Length:1030 Species:Drosophila melanogaster
Sequence 2:XP_005170070.1 Gene:pals2b / 394134 ZFINID:ZDB-GENE-040426-775 Length:580 Species:Danio rerio


Alignment Length:501 Identity:121/501 - (24%)
Similarity:186/501 - (37%) Gaps:166/501 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   566 VIEID-LVKGGKGLGFSIAGGIGNQHIPGDNGIYVTKLMDG----GAAQ--VD--GRL--SIGDK 619
            ::.:| ....|.||. |.|||.      |:.|..|::|.:|    ||.|  :|  |.|  :.|.|
Zfish     2 ILTVDETFSNGAGLN-SDAGGF------GETGEGVSELDEGADPSGAMQQVLDNLGELPSTTGAK 59

  Fly   620 LI------------AVRTNG-SEKNLENVTHELAVATLKSITDKVTLIIGKTQHLTTSASGGGGG 671
            .|            .||:.. :.:.||:|..|   |..::..:.||.|:|....|:..       
Zfish    60 DIDLIFLKGIMESPIVRSLAKAHERLEDVKLE---AVQENNVELVTDILGDISGLSVR------- 114

  Fly   672 GLSSGQQLSQSQSQLATSQSQSQVHQQQH------ATPMVNSQSTEPGSRYASTNVLAAVPPGTP 730
                    ..|.::|      |::.|:.|      |..||.|:..|           |..||...
Zfish   115 --------DDSAAEL------SKILQEPHFQSLLEAHDMVASKCYE-----------APAPPELT 154

  Fly   731 RAVSTEDITREP---RTITIQK---GPQGLGFNIVGGEDGQGIYVSFILAGGPADLGSELKRGDQ 789
            ...:..:...:.   |.|.|:|   .|.|:.|.:..|:    :.::.||.||..|....|..||.
Zfish   155 NDAAVNNALMQADAVRMIGIRKKAGEPLGVTFRMDKGD----LVIARILHGGLIDRQGLLHVGDI 215

  Fly   790 LLSVNNVNL-THATHEEAAQALKTSGGVVTL--LAQYR----PEEYNRFEARIQELKQQAALGAG 847
            :..||..:: |:.|  |..:.||...|.:||  |..||    |.:                    
Zfish   216 IKEVNGKDVGTNPT--ELQEMLKECSGGITLKILPSYRDAPAPPQ-------------------- 258

  Fly   848 GSGTLLRTTQKRSLYVRALFDYDPNRDDGLPSR--GLPFKHGDILHVTNASDDEWWQARRVLGDN 910
                         :||:..|||:|..|:.:|.|  ||.||.||||.:.|..|..||||..:    
Zfish   259 -------------VYVKPHFDYNPASDNLIPCREAGLAFKRGDILQIVNREDPNWWQACHL---- 306

  Fly   911 EDEQIGIVPSKRRWERKMRARDRSVKFQGHAAANNNLDKQSTLDRKKKNFTFSRKFPFMKSRDEK 975
            .:...|::||:...|::.....|.:...|...        .|:..|||     :|          
Zfish   307 AEGGTGLIPSQFLEEKRKAFVPRDLDGAGILC--------GTMTGKKK-----KK---------- 348

  Fly   976 NEDGSDQEPFMLCYTQDDANAEGGEI-IYR--VELPDMEQITLIYL 1018
                      |:..|..:|..:..|: ||.  ..:|..::.|||.:
Zfish   349 ----------MMYLTAKNAEFDRHELQIYEEVARMPPFQRKTLILI 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlg1NP_001162718.1 L27_1 303..359 CDD:286187
PDZ 454..540 CDD:214570
PDZ_signaling 566..655 CDD:238492 31/112 (28%)
PDZ_signaling 742..820 CDD:238492 26/86 (30%)
SH3_DLG-like 862..922 CDD:212795 26/61 (43%)
pals2bXP_005170070.1 L27 43..96 CDD:197794 14/55 (25%)
L27 98..149 CDD:280918 16/82 (20%)
PDZ_signaling 169..247 CDD:238492 26/83 (31%)
SH3_MPP 260..317 CDD:212796 25/60 (42%)
Guanylate_kin 377..567 CDD:279019 3/8 (38%)
GuKc 387..568 CDD:214504
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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