DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlg1 and caska

DIOPT Version :9

Sequence 1:NP_001162718.1 Gene:dlg1 / 32083 FlyBaseID:FBgn0001624 Length:1030 Species:Drosophila melanogaster
Sequence 2:XP_017213110.1 Gene:caska / 259195 ZFINID:ZDB-GENE-020802-4 Length:965 Species:Danio rerio


Alignment Length:417 Identity:87/417 - (20%)
Similarity:165/417 - (39%) Gaps:77/417 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   625 TNGSEKNLE---NVTHELAVATLKSITDKVTL------------IIGKTQHLTTSASGGGGGGLS 674
            |:.|||:|:   :|..:..:.||..:.||:..            .:.:.:.  ||...|....|.
Zfish   362 TDCSEKDLDFLHSVFQDHHLHTLLDLYDKINTKSSPQIRNPSSDAVQRAKE--TSTEDGSSAALK 424

  Fly   675 SGQQLSQSQS---QLATSQSQSQVHQQQHATPMVNSQSTEPGSRYASTNVLAAVPPGTPRA---- 732
            ..:.:.:..|   :...::...::..|.|...::.:........|:...:....||.:|..    
Zfish   425 HLEYVLEEISCYPENTDAKELRRILTQPHFMALLQTHDVVAHEVYSDDAMRVTPPPTSPYLNGDS 489

  Fly   733 -------VSTEDITREPRTITIQKG---PQGLGFNIVGGEDGQGIYVSFILAGGPADLGSELKRG 787
                   :..|::|| .|.:..||.   |.|:...:   .|.....|:.|:.||.......|..|
Zfish   490 PESTNGDMDIENVTR-VRLVQFQKNTDEPMGITLKM---NDLNHCIVARIMHGGMIHRQGTLHIG 550

  Fly   788 DQLLSVNNVNLTHATHEEAAQALKTSGGVVT--LLAQYRPEEYNRFEARIQELKQQAALGAGGSG 850
            |::..:|.:::.:.|.|:..:.|:...|.:|  ::..||.::.:..:......:|..|.|.....
Zfish   551 DEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSYRTQQSSCEKESPSTSRQSPANGHSSIN 615

  Fly   851 T----LLRTTQKR---------------SLYVRALFDYDPNRDDGLPSR--GLPFKHGDILHVTN 894
            :    |..|.|.:               .:||||.|:|||.:||.:|.:  |:.|:.|||:.:.|
Zfish   616 SSILDLPSTIQPKGRQISRPPIKDKFSIKIYVRAQFEYDPVKDDLIPCKEAGIRFRVGDIIQIIN 680

  Fly   895 ASDDEWWQARRVLGDNEDEQIGIVPSK--RRWERKMRARDRSVKFQGHAAANNNLDKQSTLDR-- 955
            ..|..|||.:  |.:.::...|::||.  :.|.....|.:::.:.|..:.......|:...|:  
Zfish   681 KDDHNWWQGK--LENTKNGTAGLIPSPELQEWRVACIAMEKTKQEQQASCTWFGKKKKQYKDKYL 743

  Fly   956 KKKNFTFSR----------KFPFMKSR 972
            .|.|..|.:          |.|..|.:
Zfish   744 AKHNAVFDQLDLVTYEEVVKLPAFKRK 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlg1NP_001162718.1 L27_1 303..359 CDD:286187
PDZ 454..540 CDD:214570
PDZ_signaling 566..655 CDD:238492 10/44 (23%)
PDZ_signaling 742..820 CDD:238492 19/82 (23%)
SH3_DLG-like 862..922 CDD:212795 25/63 (40%)
caskaXP_017213110.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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