DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dlg1 and PDZD2

DIOPT Version :9

Sequence 1:NP_001162718.1 Gene:dlg1 / 32083 FlyBaseID:FBgn0001624 Length:1030 Species:Drosophila melanogaster
Sequence 2:XP_005248326.1 Gene:PDZD2 / 23037 HGNCID:18486 Length:2873 Species:Homo sapiens


Alignment Length:1087 Identity:217/1087 - (19%)
Similarity:358/1087 - (32%) Gaps:380/1087 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 ETVTEPDPEPPK---CPTSLRDSV--RESVECFYSAQDLLEYGHMLSSTSMVRTPDVESGYFEKS 174
            |:...||..||:   |...|...:  .|:|.        |.:|::          .|...|.||.
Human    54 ESTVPPDHSPPEMEICTVYLTKELGDTETVG--------LSFGNI----------PVFGDYGEKR 100

  Fly   175 ESDASRDEWEGP----------------SSSSSGAARCR----LLSG--ISGLSVSSSSRHSAEG 217
            .....|...:||                .:..||..|.|    .|:|  :.|:.||.:| :.||.
Human   101 RGGKKRKTHQGPVLDVGCIWVTELRKNSPAGKSGKVRLRDEILSLNGQLMVGVDVSGAS-YLAEQ 164

  Fly   218 -------LRMELSRFRTMIETLERESLEKSQSELQLKAKSKAKPKPKQRSHVQDAAGESGSEQGS 275
                   ..:.|.||:           .|:.|.....:.:.::|.......:.|...:.|..   
Human   165 CWNGGFIYLIMLRRFK-----------HKAHSTYNGNSSNSSEPGETPTLELGDRTAKKGKR--- 215

  Fly   276 ERGFWSTIFGQAGLAISQDEEERIADIQKAHRALELLEDYHARLSEPQDRALRIAIERVIRIFKS 340
                 :..||    .||:....:..:..|.....|:..|....|                     
Human   216 -----TRKFG----VISRPPANKAPEESKGSAGCEVSSDPSTEL--------------------- 250

  Fly   341 RLFQALLDIQEFYELTLLDDSKSIQQKTAETLQIATKWEKDGQAVKIADNQRMRIESDTENAKE- 404
                                                   ::|...::.:....::|:..::.|| 
Human   251 ---------------------------------------ENGPDPELGNGHVFQLENGPDSLKEV 276

  Fly   405 --PTVEQQQKQQQAQQRSSRSPQQQNPQQQQGSKSRSGSQTVNGDDSWLYEDI------QLERGN 461
              |.:|:.:..:..:.|..::.........:...|:.|.......|....|::      :|.:.:
Human   277 AGPHLERSEVDRGTEHRIPKTDAPLTTSNDKRRFSKGGKTDFQSSDCLAREEVGRIWKMELLKES 341

  Fly   462 SGLGFSIAGGTD---NPHIGTDTSIYITKLISGGAAAADGRLSINDIIVSVNDVSVVDVPHASAV 523
            .|||..::||..   :||     :|.:|::..||||..|||||:.|.::.:|...:|.:.|..||
Human   342 DGLGIQVSGGRGSKRSPH-----AIVVTQVKEGGAAHRDGRLSLGDELLVINGHLLVGLSHEEAV 401

  Fly   524 DALKKAGNVVKLHVKRK------------------------------------------------ 540
            ..|:.|..:|:|.|..|                                                
Human   402 AILRSATGMVQLVVASKENSAEDLLRLTSKSLPDLTSSVEDVSSWTDNEDQEADGEEDEGTSSSV 466

  Fly   541 -------------------RGTATTPAAGS---------------------------AAGDAR-- 557
                               :|...:|..||                           ..||.|  
Human   467 QRAMPGTDEPQDVCGAEESKGNLESPKQGSNKIKLKSRLSGGVHRLESVEEYNELMVRNGDPRIR 531

  Fly   558 -----------------DSAASG--------------------------PKVIE-IDLVK-GGKG 577
                             ||:::.                          |.||. |.|.| .|||
Human   532 MLEVSRDGRKHSLPQLLDSSSASQEYHIVKKSTRSLSTTQVESPWRLIRPSVISIIGLYKEKGKG 596

  Fly   578 LGFSIAGGIGNQHIPGDNGIYVTKLMDGGAAQVDGRLSIGDKLIAVRTNGSEKNLENVTHELAVA 642
            |||||||  |...|.|..||:|..:...|:|..||||..||:::.|  ||..  ::.:|.:.|:.
Human   597 LGFSIAG--GRDCIRGQMGIFVKTIFPNGSAAEDGRLKEGDEILDV--NGIP--IKGLTFQEAIH 655

  Fly   643 TLKSITDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLATSQSQSQVHQQQHATPMVNS 707
            |.|.|...:.::..:|:.::.|                       .:...:..|..:.|:|..|:
Human   656 TFKQIRSGLFVLTVRTKLVSPS-----------------------LTPCSTPTHMSRSASPNFNT 697

  Fly   708 Q--STEPGSRYASTNVLAAVPPG-TPRAVSTEDITREPRTITIQKGPQGLGFNIVGG------ED 763
            .  ::..||...|::.|....|| ..|.|....:.:|||.        |||   :|.      ..
Human   698 SGGASAGGSDEGSSSSLGRKTPGPKDRIVMEVTLNKEPRV--------GLG---IGACCLALENS 751

  Fly   764 GQGIYVSFILAGGPADLGSELKRGDQLLSVNNVNLTHATHEEAAQAL-KTSGGVVTLLAQYRP-- 825
            ..|||:..:..|..|.:.|.|.||||:|.||:||:.||...:....| |...|.|.|:....|  
Human   752 PPGIYIHSLAPGSVAKMESNLSRGDQILEVNSVNVRHAALSKVHAILSKCPPGPVRLVIGRHPNP 816

  Fly   826 ----EEYNRFEARIQELKQQAALGAGGSGTLLRT---TQKRSLY----VRALFDYDPNRDDGLPS 879
                :|.:...||....:.:.|..:.|.||.|::   .:|.||.    :...|.:|         
Human   817 KVSEQEMDEVIARSTYQESKEANSSPGLGTPLKSPSLAKKDSLISESELSQYFAHD--------- 872

  Fly   880 RGLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKRRWERKMRARDRSVKFQGHAAAN 944
              :|....|.: |..:.|::    ....|.:..|:..:.||....:...:.|..|:...|...|:
Human   873 --VPGPLSDFM-VAGSEDED----HPGSGCSTSEEGSLPPSTSTHKEPGKPRANSLVTLGSHRAS 930

  Fly   945 NNLDKQSTLDRKKK--NFTFSRKFPFMKSRD----EKNEDGSDQEPF 985
            ....||.|:.|:..  ....:.:.|.::.|.    :.| |.||:|.|
Human   931 GLFHKQVTVARQASLPGSPQALRNPLLRQRKVGCYDAN-DASDEEEF 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlg1NP_001162718.1 L27_1 303..359 CDD:286187 4/55 (7%)
PDZ 454..540 CDD:214570 30/94 (32%)
PDZ_signaling 566..655 CDD:238492 37/90 (41%)
PDZ_signaling 742..820 CDD:238492 28/84 (33%)
SH3_DLG-like 862..922 CDD:212795 10/63 (16%)
PDZD2XP_005248326.1 PDZ_signaling 335..416 CDD:238492 29/85 (34%)
PDZ_signaling 589..670 CDD:238492 34/86 (40%)
PDZ_signaling 726..810 CDD:238492 31/94 (33%)
PDZ_signaling 2623..2694 CDD:238492
PDZ 2785..2867 CDD:214570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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