DRSC/TRiP Functional Genomics Resources

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Protein Alignment dlg1 and Patj

DIOPT Version :9

Sequence 1:NP_001162718.1 Gene:dlg1 / 32083 FlyBaseID:FBgn0001624 Length:1030 Species:Drosophila melanogaster
Sequence 2:XP_038965114.1 Gene:Patj / 140581 RGDID:1565362 Length:1858 Species:Rattus norvegicus


Alignment Length:897 Identity:198/897 - (22%)
Similarity:342/897 - (38%) Gaps:237/897 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 RCDQDQPPLVVLVQPSAEAIEVRQEIDDTNPVAVAAKASDMDGDSQLEVMEHQMETVTEPDPE-- 123
            |.:|::.||..|  |||..:        |.|.:.....|....::..|:.|.: |...|..|.  
  Rat  1016 RREQEELPLYRL--PSARVV--------TKPSSHVGMVSSRHANAACELPERE-EGEGEETPNFS 1069

  Fly   124 ---PPKCPTSLRDSVRESVECFYSAQDLLEYGHMLSSTSMVRTPDVE--SGYFEKSESDASRDEW 183
               ||:.           ||.|......|....:...|.:.|..:.|  .|.|.|...:      
  Rat  1070 HWGPPRI-----------VEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLE------ 1117

  Fly   184 EGPSSSSSGAARCRLLSGISGLSVSSSSRHSA-EGLR----------MELSRFRTMIETLERESL 237
            :.|:..:........:..:||:.:.::|...| |.::          ..||....:|.::..:..
  Rat  1118 DSPAGKTKALKTGDKILEVSGVDLQNASHAEAVEAIKSAGNPVVFVVQSLSSTPRVIPSVNNKGK 1182

  Fly   238 EKSQSELQLKAKSKAK-----PKPKQ--RSHVQDAAGESGSEQGSERGFWSTIFGQAGLAISQDE 295
            ...|::.|...:.|||     |.|.:  ..:...:|....||:.|              |::..:
  Rat  1183 TPPQNQDQNTQEKKAKRHGTAPPPMKLPPPYRAPSADTEESEEDS--------------ALTDKK 1233

  Fly   296 -EERIADIQKAHRALELLEDYHA---RLSEPQDRALRIAIERVIRI---------FKSRLFQALL 347
             .:|.||:......:||.:|.:.   .|:..:||: |::| .|:.|         .:.|:...||
  Rat  1234 IRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRS-RMSI-FVVGINPDGPAAADGRMRVGDELL 1296

  Fly   348 DI--QEFY------------------ELTLLDDSKSIQQKTAE-----------------TLQIA 375
            :|  |..|                  :|..:.:..::.|....                 |..::
  Rat  1297 EINNQILYGRSHQNASAIIKTAPTRVKLVFIRNEDAVNQMAVAPFPVPSHSPSPVEDLGGTEPVS 1361

  Fly   376 TKWEKDGQAVKIADNQRMRIESDTENAKEPTVEQQQKQQQAQQRSSRSPQQQNPQQQQGSKS--- 437
            ::.:....|..:.:.:..:.|..|:...:..|.:|:|..::...::|..:|.....|..|.|   
  Rat  1362 SEEDSSVDAKPLPERESSKPEDLTQAVDDSMVAEQEKASESPDSAARQMKQPGYSAQVSSSSQEI 1426

  Fly   438 --------RSGSQTVNG----------DDSWLYED-------------IQLERGNSGLGFSIAGG 471
                    :|....|.|          |.:.|..|             |::.:|.||||.||.||
  Rat  1427 PSAPAPLCQSTHADVTGSGNFQAPLSVDPAPLSVDPATCPIVPGQEMIIEISKGRSGLGLSIVGG 1491

  Fly   472 TDNPHIG------------------TDTSIYITKLISGGAAAADGRLSINDIIVSVNDVSVVDVP 518
            .|.|..|                  :..:|.|.::...||||.||||...|.|:.||.|.:....
  Rat  1492 KDTPLPGGSLPTKVGVWEKKLQEMMSQDAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRSSS 1556

  Fly   519 HASAVDALKKAGNVVKLHVKRKRGTATTPAAGSAAGDARDSAASGPKVIEIDL-VKGGKGLGFSI 582
            |..|:.||::....|:|.:.|              .:|:.......:|..:|| .|.|:|||.||
  Rat  1557 HEEAITALRQTPQKVRLVIYR--------------DEAQYRDEENLEVFLVDLQKKTGRGLGLSI 1607

  Fly   583 AGGIGNQHIPGDNGIYVTKLMDGGAAQVDGRLSIGDKLIAVRTNGSEKNLENVTHELAVATLKSI 647
            .|.      ...:|::::.::.||||.:||||..||::::|  ||  :::...:.|.....||.:
  Rat  1608 VGK------RSGSGVFISDIVKGGAADLDGRLIRGDQILSV--NG--EDVRQASQETVATILKCV 1662

  Fly   648 TDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLATSQSQSQVHQQQHA-----TPMVNS 707
            ...|.|.||:.:          .|..:|.::.||:        ||...|....:     .|::.|
  Rat  1663 QGLVQLEIGRLR----------AGSWASSRKTSQN--------SQGDQHSAHSSCRPSFAPVITS 1709

  Fly   708 QSTEPGSRYASTNVLAAVPPGTPRAVSTEDITREPRTI-TIQKGPQGLGFNIVGGEDGQ----GI 767
            .....|::.:|          .|....||:   ||||: .|::....||.:|.||:...    .|
  Rat  1710 LQNLVGTKRSS----------DPPQKCTEE---EPRTVEIIRELSDALGVSIAGGKGSPLGDIPI 1761

  Fly   768 YVSFILAGGPADLGSELKRGDQLLSVNNVNLTHATHEEAAQALKTSGGVVTL 819
            :::.|.|.|.|....:||.||:::|:|...|...:|.:|...||.:.|.:.|
  Rat  1762 FIAMIQANGVAARTQKLKVGDRIVSINGQPLDGLSHTDAVNLLKNAFGRIIL 1813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlg1NP_001162718.1 L27_1 303..359 CDD:286187 17/87 (20%)
PDZ 454..540 CDD:214570 35/116 (30%)
PDZ_signaling 566..655 CDD:238492 30/89 (34%)
PDZ_signaling 742..820 CDD:238492 27/83 (33%)
SH3_DLG-like 862..922 CDD:212795
PatjXP_038965114.1 L27_2 8..65 CDD:312549
PDZ_signaling 135..218 CDD:238492
PDZ_signaling 248..325 CDD:238492
PDZ_signaling 366..450 CDD:238492
CtpA <391..>511 CDD:223864
PDZ_signaling 572..636 CDD:238492
PDZ 684..773 CDD:214570
PDZ_signaling 1074..1165 CDD:238492 17/107 (16%)
PDZ 1244..1329 CDD:214570 17/86 (20%)
PDZ 1471..1578 CDD:214570 35/120 (29%)
PDZ_signaling 1590..1670 CDD:238492 30/89 (34%)
PDZ_signaling 1731..1816 CDD:238492 27/83 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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