DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dlg1 and magi3

DIOPT Version :9

Sequence 1:NP_001162718.1 Gene:dlg1 / 32083 FlyBaseID:FBgn0001624 Length:1030 Species:Drosophila melanogaster
Sequence 2:XP_012811019.1 Gene:magi3 / 100036692 XenbaseID:XB-GENE-981179 Length:1595 Species:Xenopus tropicalis


Alignment Length:996 Identity:207/996 - (20%)
Similarity:365/996 - (36%) Gaps:276/996 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DTDSEREKSSDPNEGLLSSDDKTFHDDDEPAEDSSPADDEEEPEEEECLLPQKKAQIRCDQDQPP 68
            ||:::|::::.     :|...:|         |||..::|:| ||.|.:.....:....|:.:|.
 Frog   211 DTETQRKRTTS-----VSKMQRT---------DSSLPEEEDE-EEREAVNGSSGSTDHRDRQEPS 260

  Fly    69 LVVLVQPSAEAIEVRQEIDDTNPVAVAAKASDMD------GDSQLE-----------------VM 110
            ......||         .:.||        |.||      .|..||                 .:
 Frog   261 EWGKTVPS---------YNQTN--------SSMDFRNYLTRDENLEPLPKNWEMAYTEAGMIYFI 308

  Fly   111 EHQMETVTEPDP---EPPKCPTSLRDSVRESVECFYSAQDL--LEYG-----HMLSSTSMVRTPD 165
            :|..:|.|..||   :..|.|....|.     |..|..:.:  .:||     |:...|.      
 Frog   309 DHNTKTTTWLDPRLCKKAKAPEDCEDG-----ELPYGWEKIEDPQYGTYYVDHINQKTQ------ 362

  Fly   166 VESGYFEKSESDASRDEWEGPSSSS-------SGAARCRLLSGISGLSVSSSSRHSAEGLRMELS 223
                 |:....:|.|.:...|:.|.       ..:...|..|.:.|..:.:|.:.||.|...   
 Frog   363 -----FDNPVLEAKRKKQLNPAPSEGTVHQEPENSQFTRDPSQLKGALLHTSLKKSAMGFGF--- 419

  Fly   224 RFRTMIETLERESLEKSQSELQLKAKSKAKPKPKQRSHVQDAAGESGSEQGSERGFWSTIFGQA- 287
               |:|      ..::....||:|...|..|.      .||.....|.......|  :.:.|.. 
 Frog   420 ---TII------GGDRPDEFLQVKNVLKDGPA------AQDGKIAPGDVIVDING--TCVLGHTH 467

  Fly   288 ----------------------GLAISQDEEERIADIQKAHRAL---ELLEDYHARLSEPQDRAL 327
                                  |..:.:|.::.:|||......:   ::|......:...:.::.
 Frog   468 AEVVQMFQLIPINQYVNMTLCRGYPLPEDSDDPVADIVNTVPPIINGQMLTQGDINMGSQELKSG 532

  Fly   328 RIAIER----VIRIFKSRLFQALLDIQ--------------EFYELTLLDDSKSIQQKTAET--- 371
            .|.:::    .:.:...||....||||              |...:.||...|......|::   
 Frog   533 VIDLDQRGKPGLMVVNGRLNGPSLDIQDQRTSMASSGNSLPELVTIPLLKGPKGFGFAIADSPMG 597

  Fly   372 ----LQIATKW---EKDGQAVKIADNQRMR------------------------IESDTENAKEP 405
                :.:.::|   .:.|..:|...:|.::                        :.....:..:.
 Frog   598 QKVKMILDSQWCPGLQKGDVIKEICHQNVQNLTHIQVVEVLKQFPVGAEVPLLILRGGPPSPSKV 662

  Fly   406 TVEQQQKQQQAQQRSSRSPQQQNPQQQQGSKSRSGSQTVNGDDSWLYE----------------D 454
            |..:..||:......:.:|.:..||......:.:.|.:...|.|.:|:                |
 Frog   663 TKVKSDKQELMGSIEAIAPGEPLPQPLPFPPNLARSCSPKLDPSEVYKKSKNIFEDKPPNTKDLD 727

  Fly   455 IQLERGNSGLGFSIAGGTDNPHIGTDTSIYITKLISGGAAAADGRLSINDIIVSVNDVSVVDVPH 519
            :.|.:..||.||.:.||.     |.|.:|||..:|..|||..||||...|.::.::.|.|....|
 Frog   728 VFLRKQESGFGFRVLGGD-----GPDQAIYIGAIIPLGAAEKDGRLRAADELICIDGVPVKGKSH 787

  Fly   520 ASAVDALKKA---GNVVKLHVKR-----------KRGTATTPAAGSAAGDARDSAASGPKV--IE 568
            ...:|.:..|   |:|: |.|:|           :....|.||...:....|...::.||:  ..
 Frog   788 KQVLDLMTNAARNGHVL-LTVRRQIYYTDKQQEEEELQHTPPAHNGSPRLNRIEVSAIPKLPAEA 851

  Fly   569 IDLV---KGGKGLGFSIAGGIGNQHIPGDNGIYVTKLMDGGAAQVDGRLSIGDKLIAVRTNGSEK 630
            .|::   |..:|.||.|... .|:..||.....:.::::|..|....:|.:||::.||  ||  :
 Frog   852 YDVILQRKDNEGFGFVILTS-KNKPPPGVIPHKIGRVIEGSPADRCRKLKVGDRISAV--NG--Q 911

  Fly   631 NLENVTHELAVATLKSITDKVTL-IIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLATSQSQSQ 694
            ::..::|:..|..:|...:.||| :|.:.:|          .|..||            |.|..|
 Frog   912 SIVELSHDNIVQLIKDAGNTVTLTVIAEEEH----------RGPPSG------------SNSARQ 954

  Fly   695 VHQQQHATPMVNSQSTEPGS--RYASTNVLA----AVPPGTPRAVSTEDITREPRTITIQKGPQG 753
            ....|| .||..:|.|. |:  ||:.::..|    |:|.|:.:|   :.:...|  :.:::||:|
 Frog   955 SPAPQH-RPMGQTQPTY-GTLDRYSWSDHKADCGPALPAGSWQA---QSVGCYP--VELERGPRG 1012

  Fly   754 LGFNIVGGED-GQGIYVSFILAGGPADLGSELKRGDQLLSVNNVNLTHATHEEAAQALKTSGGVV 817
            .||::.||:: ..|:::..:...|||.....:..|||::.:||......||..|.:.::..|..|
 Frog  1013 FGFSLRGGKEYNMGLFILRLAEDGPAIKDGRIHVGDQIVEINNEPTQGITHTRAIELIQAGGSKV 1077

  Fly   818 TLLAQYRP-----EEYNRFEA 833
            .||  .||     .:||..::
 Frog  1078 LLL--LRPGTGLIPDYNELDS 1096

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlg1NP_001162718.1 L27_1 303..359 CDD:286187 10/76 (13%)
PDZ 454..540 CDD:214570 32/99 (32%)
PDZ_signaling 566..655 CDD:238492 24/94 (26%)
PDZ_signaling 742..820 CDD:238492 22/78 (28%)
SH3_DLG-like 862..922 CDD:212795
magi3XP_012811019.1 PDZ_signaling 31..97 CDD:238492
NK 119..>193 CDD:388413
WW 290..322 CDD:197736 5/31 (16%)
WW 337..368 CDD:197736 6/41 (15%)
PDZ 410..490 CDD:214570 15/99 (15%)
PDZ 574..655 CDD:214570 9/80 (11%)
PDZ_signaling 727..808 CDD:238492 30/86 (35%)
PDZ_signaling 852..937 CDD:238492 24/89 (27%)
PDZ_signaling 1004..1082 CDD:238492 23/79 (29%)
PTZ00121 <1202..1571 CDD:173412
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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