DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tim8 and Timm13

DIOPT Version :10

Sequence 1:NP_572713.1 Gene:Tim8 / 32081 FlyBaseID:FBgn0027359 Length:88 Species:Drosophila melanogaster
Sequence 2:NP_038923.1 Gene:Timm13 / 30055 MGIID:1353432 Length:95 Species:Mus musculus


Alignment Length:86 Identity:27/86 - (31%)
Similarity:48/86 - (55%) Gaps:7/86 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SDFENLSGNDKELQEFLLIEKQKAQV---NAQ--IHEFNEICWEKCIGKPSTKLDHATETCLSNC 61
            |||....|.  :|....::|:.|.|:   |||  :....:.|:.||||||...||::.:.|::.|
Mouse     7 SDFGGTGGG--KLDPGAIMEQVKVQIAVANAQELLQRMTDKCFRKCIGKPGGSLDNSEQKCIAMC 69

  Fly    62 VDRFIDTSLLITQRFAQMLQK 82
            :||::|....:::.:...||:
Mouse    70 MDRYMDAWNTVSRAYNSRLQR 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim8NP_572713.1 zf-Tim10_DDP 16..78 CDD:460764 20/66 (30%)
Timm13NP_038923.1 zf-Tim10_DDP 24..86 CDD:460764 20/61 (33%)
Twin CX3C motif 46..69 10/22 (45%)

Return to query results.
Submit another query.