DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hop and AT5G61560

DIOPT Version :9

Sequence 1:NP_511119.2 Gene:hop / 32080 FlyBaseID:FBgn0004864 Length:1177 Species:Drosophila melanogaster
Sequence 2:NP_001330716.1 Gene:AT5G61560 / 836277 AraportID:AT5G61560 Length:815 Species:Arabidopsis thaliana


Alignment Length:499 Identity:101/499 - (20%)
Similarity:190/499 - (38%) Gaps:121/499 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   764 FATTIYEIFSRCK--EDLSTLRQEQLLRQKNLDGNILKMLDQDICPAPIFETIMDGWSDD--ETK 824
            :|....|:....|  :||:..|.|:..|.|||                   ||.:..:|:  |.:
plant   332 YAVAQSEVIDASKKMQDLNQRRSEEATRLKNL-------------------TIREEEADEVVEME 377

  Fly   825 RFSHHDIFSRLNTIK-------AEILPNYMPPPEIATNGTGDETVIDRSDIPFLPFPRSNMLMVI 882
            |....|..:....::       .|.|.......|:.......|..::...:....:.:.....::
plant   378 RERQEDAENEAELVRECIERETEERLEAEARAEEVRKEKQRLEDALEGGPLQRQQYMKFEWEEIV 442

  Fly   883 PLTSECRVIYNMENMIGRGHYGTVYKGHLEFNDKDQPREQVAIKMLNT--MQVSTDFHREIGIMR 945
            ..||.    ::.|..||.|.||:||:.:|.       ...||:|:|::  ..::..||:|:.|:.
plant   443 EATSS----FSDELKIGVGGYGSVYRCNLH-------HTTVAVKVLHSDKSSLTKQFHQELEILS 496

  Fly   946 TLSHPNIVKFKYWAEKSHCIIMEYLQSGSFDIYLRFTAPNLNNPR--------LVSFALDIANGM 1002
            .:.||:::.......:...::.||:.:||.:..|....||::.|:        ....|.:||:.:
plant   497 KIRHPHLLLLLGACPERGSLVYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASAL 561

  Fly  1003 KYL---SDMGLIHRDLAARNILVDHNGDGDCVKISDFGLAQFANSDGYYYAKSKRDI-PIR---W 1060
            .:|   ....::||||...|||:|.|   :..||.|.||::..|.|..:.:....:. |:.   :
plant   562 YFLHTNEPRPIVHRDLKPANILLDRN---NVSKIGDVGLSKMVNLDPSHASTVFNETGPVGTFFY 623

  Fly  1061 YSPEAISTCRFSSYSDVWSYGVTLFEMFSRGEEPNLV-------------------------PIQ 1100
            ..||...|...:..||::::|:.|.::.:......|.                         |::
plant   624 IDPEYQRTGVVTPESDIYAFGIILLQLVTARSAMGLAHSIEKALRDQTGKFTEILDKTAGDWPVK 688

  Fly  1101 TSQEDFLNRLQSGERLNRPASCPDF---IYDLMQLCWHATPRSRPSFA-TIVD-----------I 1150
            .::|..:..|:..|...|..  ||.   |..:::........:|..|| .::|           .
plant   689 EAKEMVMIGLRCAEMRKRDR--PDLGKEILPVLERLKEVASIARNMFADNLIDHHHNAPTHFYCP 751

  Fly  1151 ITREVATKVTHPTDG---------------HQSPPNQ---PTDA 1176
            ||::|.......:||               |:||...   |:|:
plant   752 ITKDVMENPCVASDGYTYEKRAIKEWLQKNHKSPMTDLPFPSDS 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hopNP_511119.2 B41 39..259 CDD:214604
SH2_Jak_family 420..516 CDD:198177
PTK_Jak_rpt1 584..836 CDD:270633 17/75 (23%)
PTKc_Jak_rpt2 886..1155 CDD:270634 71/325 (22%)
TyrKc 894..1151 CDD:197581 68/313 (22%)
AT5G61560NP_001330716.1 STK_N 26..173 CDD:238947
Smc <317..>424 CDD:224117 21/110 (19%)
PKc_like 454..722 CDD:419665 63/279 (23%)
Ubox 747..809 CDD:128780 10/49 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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