DRSC/TRiP Functional Genomics Resources

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Protein Alignment hop and abl2

DIOPT Version :9

Sequence 1:NP_511119.2 Gene:hop / 32080 FlyBaseID:FBgn0004864 Length:1177 Species:Drosophila melanogaster
Sequence 2:XP_005166946.1 Gene:abl2 / 570636 ZFINID:ZDB-GENE-020809-2 Length:1182 Species:Danio rerio


Alignment Length:369 Identity:121/369 - (32%)
Similarity:184/369 - (49%) Gaps:56/369 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   833 SRLNTIKAEILPNYMPPPEIATNGTGDETVIDRSDIPFLPFPRSN---MLMVIPLTSEC---RVI 891
            ||.:|: ||::.::      :|...|..|.:      ..|.|:.|   :..|.|:..:.   |..
Zfish   241 SRFSTL-AELVHHH------STVADGLVTTL------HYP
APKCNKPTVYGVSPIHDKWEMERTD 292

  Fly   892 YNMENMIGRGHYGTVYKG-HLEFNDKDQPREQVAIKML--NTMQVSTDFHREIGIMRTLSHPNIV 953
            ..|::.:|.|.||.||.| ..::|      ..||:|.|  :||:|. :|.:|..:|:.:.|||:|
Zfish   293 ITMKHKLGGGQYGEVYVGVWKKYN------LTVAVKTLKEDTMEVE-EFLKEASVMKEVKHPNLV 350

  Fly   954 KF--KYWAEKSHCIIMEYLQSGSFDIYLR-FTAPNLNNPRLVSFALDIANGMKYLSDMGLIHRDL 1015
            :.  ....|....|:.||:..|:...||| .....:|...|:..|..|::.|:||.....|||||
Zfish   351 QLLGVCTLEPPFYIVTEYMPHGNLLDYLRECERDQVNAVVLLYMATQISSAMEYLEKKNFIHRDL 415

  Fly  1016 AARNILVDHNGDGDCVKISDFGLAQFANSDGYYYAKSKRDIPIRWYSPEAISTCRFSSYSDVWSY 1080
            ||||.||   |:...||::||||::....| .|.|.:....||:|.:||:::...||..||||::
Zfish   416 AARNCLV---GENHVVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAF 476

  Fly  1081 GVTLFEMFSRGEEPNLVP-IQTSQEDFLNRLQSGERLNRPASCPDFIYDLMQLCWHATPRSRPSF 1144
            ||.|:|:.:.|..|  .| |..||  ..:.|:.|.|:.:|..||..:|:||:.||..:|..||||
Zfish   477 GVLLWEIATYGMSP--YPGIDLSQ--VYDLLEKGYRMEQPEGCPPKVYELMRACWQWSPLDRPSF 537

  Fly  1145 ATIVDI---------ITREVATKVTHPTDGHQS------PPNQP 1173
            |.|...         |:.|||.::.....|.||      .|:.|
Zfish   538 AEIHQAFETMFHDSSISEEVAEELCKTASGGQSGVAHTFGPDMP 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hopNP_511119.2 B41 39..259 CDD:214604
SH2_Jak_family 420..516 CDD:198177
PTK_Jak_rpt1 584..836 CDD:270633 2/2 (100%)
PTKc_Jak_rpt2 886..1155 CDD:270634 100/287 (35%)
TyrKc 894..1151 CDD:197581 98/272 (36%)
abl2XP_005166946.1 SH3_Abl 116..169 CDD:212784
SH2_ABL 174..267 CDD:198189 8/38 (21%)
PTKc_Abl 286..548 CDD:270645 99/276 (36%)
Pkinase_Tyr 293..544 CDD:285015 98/265 (37%)
FABD 1057..1182 CDD:197885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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