DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hop and frk

DIOPT Version :9

Sequence 1:NP_511119.2 Gene:hop / 32080 FlyBaseID:FBgn0004864 Length:1177 Species:Drosophila melanogaster
Sequence 2:XP_021324228.1 Gene:frk / 567549 ZFINID:ZDB-GENE-110411-7 Length:512 Species:Danio rerio


Alignment Length:500 Identity:134/500 - (26%)
Similarity:206/500 - (41%) Gaps:127/500 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   709 LYVTKYDPNSYVLDAKISDPGYP-RPYRESDSPW---------------IPVKYYRNLQAAKTDQ 757
            |||..||..:...|....:.|.. .|..:.:..|               ||..|...:::..   
Zfish    56 LYVALYDYTARTDDDLSFNAGDKLEPITKGEDWWFSKAITGISANKKGYIPANYVAPVESLD--- 117

  Fly   758 FAQLWAFATTIYEIFSRCKEDLSTLRQEQLLRQKNLDGNIL------------------------ 798
             |:.|.|..|       .:.|    .::.|:.|:|..|..|                        
Zfish   118 -AEPWYFPET-------KRSD----AEKMLISQENKKGAFLIRNCESQPGELSLSVRDDVKVKHY 170

  Fly   799 --KMLDQD---ICPAPIFETIMDGWSDDETKRFSHHD--IFSRL-NTIKAEILPNYMPPPEIATN 855
              :.||..   :..|..|.|:.     :..:.:|.|:  :..|| ...|..:.|.        |:
Zfish   171 KIRKLDNGGYYLSTARNFPTLR-----ELVEHYSKHEDGLCVRLAEPCKKSVAPE--------TH 222

  Fly   856 G----TGDETVIDRSDIPFLPFPRSNMLMVIPLTSECRVIYNMENMIGRGHYGTVYKGHLEFNDK 916
            |    |.|:..|:||.:..|                        ..:|.|.:|.|::|  .:|| 
Zfish   223 GLSYNTVDQWEIERSSVKLL------------------------KQLGAGQFGEVFEG--LWND- 260

  Fly   917 DQPREQVAIKMLNTMQVS-TDFHREIGIMRTLSHPNIVKFKYWA----EKSHCIIMEYLQSGSFD 976
               ...||:|.|....:. .||.||..||:.|.|..:::.  :|    |:...||.|.:.:||..
Zfish   261 ---TTPVAVKTLKPGNMDPKDFLREAQIMKKLRHSKLIQL--YAVCTLEEPIYIITELMSNGSLL 320

  Fly   977 IYLR-FTAPNLNNPRLVSFALDIANGMKYLSDMGLIHRDLAARNILVDHNGDGDCVKISDFGLA- 1039
            .||: .....|.....:.....:|:||.||.....|||||||||:||   ||.:..|::||||| 
Zfish   321 EYLQNDRGATLRMSDQIDMGAQVASGMAYLELQNYIHRDLAARNVLV---GDNNVCKVADFGLAR 382

  Fly  1040 --QFANSDGYYYAKSKRDIPIRWYSPEAISTCRFSSYSDVWSYGVTLFEMFSRGEEPNLVPIQTS 1102
              |..|.|..|.||.....|::|.:||||:..:|:..|||||:|:.|:|:.:.|:.|  .|..|:
Zfish   383 VFQMDNEDNVYEAKEGTKFPVKWTAPEAINENKFTIKSDVWSFGILLYEIVTFGQTP--YPTMTN 445

  Fly  1103 QEDFLNRLQSGERLNRPASCPDFIYDLMQLCWHATPRSRPSFATI 1147
            .: .:.:|..|.|::.|.:|...:||:|..||...|..||:|.|:
Zfish   446 FQ-VVQQLPKGYRMSSPPNCHKCLYDIMLDCWKDVPADRPTFETL 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hopNP_511119.2 B41 39..259 CDD:214604
SH2_Jak_family 420..516 CDD:198177
PTK_Jak_rpt1 584..836 CDD:270633 31/174 (18%)
PTKc_Jak_rpt2 886..1155 CDD:270634 93/270 (34%)
TyrKc 894..1151 CDD:197581 93/262 (35%)
frkXP_021324228.1 SH3_Src_like 56..109 CDD:212779 11/52 (21%)
SH2_Src_family 117..212 CDD:199827 19/114 (17%)
PTKc_Frk_like 230..500 CDD:270653 98/297 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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