DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hop and matk

DIOPT Version :9

Sequence 1:NP_511119.2 Gene:hop / 32080 FlyBaseID:FBgn0004864 Length:1177 Species:Drosophila melanogaster
Sequence 2:XP_695792.1 Gene:matk / 567405 ZFINID:ZDB-GENE-070705-183 Length:445 Species:Danio rerio


Alignment Length:490 Identity:119/490 - (24%)
Similarity:196/490 - (40%) Gaps:140/490 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   680 LLDLMHGLVRGMHYLEDNK-------IIHNYIRCSNLYVTKYDPNSYVLDAKISDP--GYPRPYR 735
            |:...||.:.|...::..|       ::...:|         .|..:||....|..  .|...|:
Zfish    78 LMPWFHGKIAGQQAVDKLKPTEDGLFLVRESVR---------HPGDFVLCVCFSQKVFHYRVIYQ 133

  Fly   736 ESDSPWIPVKYYRNLQAAKTDQFAQLWAFATTIYEIFSRCKEDLSTLRQEQLLRQKNLDGNILKM 800
            ::......::::.||               ..:.|.:||.:..::||    ||:.|..:|  ||.
Zfish   134 DNKLTIDNMQFFDNL---------------IDMIEFYSRNRGAIATL----LLKPKKKEG--LKS 177

  Fly   801 LDQDICPAPIFETIMDGWSDDETKRFSHHDIFSRLNTIKAEILPNYMPPPEIATNGTGDETVIDR 865
            .:..:        :..||                                           ::|.
Zfish   178 AETKL--------LKSGW-------------------------------------------LLDL 191

  Fly   866 SDIPFLPFPRSNMLMVIPLTSECRVIYNMENMIGRGHYGTVYKGHLEFNDKDQPREQVAIKMLNT 930
            |.:                        .:..:||.|.:|.|:.|       :...::||:|::..
Zfish   192 SKL------------------------TLGEIIGEGEFGAVFAG-------EYTGQRVAVKIIKC 225

  Fly   931 MQVSTDFHREIGIMRTLSHPNIVK-FKYWAEKSHCIIMEYLQSGSFDIYL----RFTAPNLNNPR 990
            ...:..|..|..:|..|.|.|:|. ..........|:.|.:..|:...:|    ||....:   :
Zfish   226 DVTAQAFLEETSVMTNLHHKNLVPLLGVILHNGLHIVTELMTKGNLVNFLRSRGRFAVSVI---Q 287

  Fly   991 LVSFALDIANGMKYLSDMGLIHRDLAARNILVDHNGDGDCVKISDFGLAQFANSDGYYYAKSKRD 1055
            |:.||||:..||::|....|:|||||.|||||..:|   ..||||||||:..:     .|.....
Zfish   288 LLRFALDVCEGMEHLESKKLLHRDLAGRNILVSEDG---VAKISDFGLARVGS-----MAVDNSK 344

  Fly  1056 IPIRWYSPEAISTCRFSSYSDVWSYGVTLFEMFSRGEEPNLVPIQTSQEDFLNRLQSGERLNRPA 1120
            :|::|.:|||:...:||:.||||||||.|:|:||.|.:|  .|..|..| ....::.|.|::.|.
Zfish   345 LPVKWTAPEALKNKKFSTQSDVWSYGVLLWEIFSYGRQP--YPKMTVNE-VKECVEKGYRMDPPD 406

  Fly  1121 SCPDFIYDLMQLCWHATPRSRPSFATIVDIITREV 1155
            .||..:|.:|..||...|:.||||..:.:.:.:|:
Zfish   407 ECPADVYSIMTSCWQTEPKKRPSFHKLRERLEKEL 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hopNP_511119.2 B41 39..259 CDD:214604
SH2_Jak_family 420..516 CDD:198177
PTK_Jak_rpt1 584..836 CDD:270633 27/164 (16%)
PTKc_Jak_rpt2 886..1155 CDD:270634 89/273 (33%)
TyrKc 894..1151 CDD:197581 89/261 (34%)
matkXP_695792.1 SH3_CHK 9..67 CDD:212745
SH2_csk_like 77..174 CDD:198190 22/123 (18%)
PTKc_Chk 187..440 CDD:270666 92/340 (27%)
STYKc 194..437 CDD:214568 89/287 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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