DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hop and Txk

DIOPT Version :9

Sequence 1:NP_511119.2 Gene:hop / 32080 FlyBaseID:FBgn0004864 Length:1177 Species:Drosophila melanogaster
Sequence 2:XP_036020891.1 Gene:Txk / 22165 MGIID:102960 Length:543 Species:Mus musculus


Alignment Length:592 Identity:152/592 - (25%)
Similarity:233/592 - (39%) Gaps:158/592 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   611 SVTMKMLKSDGNFMEFFRLAQTWSLIQSPQFLKLYGLTLADPYTMVMEYSRYGPLNKFLHSMPN- 674
            ||..:.:::..:......|::..|..|.|.|.||.|.|.::  ...::.|:..||.......|: 
Mouse    50 SVQKRQVRTQISLSREEELSEKHSQRQRPWFAKLMGKTQSN--RGGVQPSKRKPLPPLPQEPPDE 112

  Fly   675 -VTLHCLLDLMH------GLVRGMHYLEDNKIIHNYIRCSNLYVTKYDPNSYVLDAKISDPGYPR 732
             :.:..|.|.:.      .|.|...||    |:.   ||        ||:.:....:..:.|.  
Mouse   113 RIQVKALYDFLPREPGNLALKRAEEYL----ILE---RC--------DPHWWKARDRFGNEGL-- 160

  Fly   733 PYRESDSPWIPVKYYRNLQAAKTDQFAQLWAFATTIYEIFSRCKEDLSTLRQEQLLRQKNLDGNI 797
                     ||..|....:.|..:           |||.:.:   :::..:.|:||||:..:|..
Mouse   161 ---------IPSNYVTENRLANLE-----------IYEWYHK---NITRNQTERLLRQEAKEGAF 202

  Fly   798 LKMLDQDICPAPIFETIMDGWSDDETKRFSHH------DIFSRLNTIKAEILPNYMPPPEIATNG 856
            :                         .|.|.|      .:|:|........:.:|    :|..|.
Mouse   203 I-------------------------VRDSRHLGSYTISVFTRARRHTQSSIKHY----QIKKND 238

  Fly   857 TGDETVIDRSDIPFLP------------------FPRSNMLMVIPLTSECRVIYNMENM------ 897
            :|...:.:|...|.:|                  :|...:...:|.||.    ::.|..      
Mouse   239 SGQWYITERHLFPSVPELIQYHQYNAAGLISRLRYPIGLLGSCLPATSG----FSYEKWEIDPSE 299

  Fly   898 ------IGRGHYGTVYKG----HLEFNDKDQPREQVAIKMLNTMQVS-TDFHREIGIMRTLSHPN 951
                  ||.|.:|.|:.|    |:          .||||.:|...:| .||..|..:|..|||..
Mouse   300 LAFVKEIGSGQFGVVHLGEWRAHI----------PVAIKAINEGSMSEEDFIEEAKVMMKLSHSR 354

  Fly   952 IVKFKYWA---EKSHCIIMEYLQSGSFDIYLRFTAPNLNNPRLVSFALDIANGMKYLSDMGLIHR 1013
            :|:. |..   :|...|:.|::::|....|||.....|....|:|...||..||.||.....|||
Mouse   355 LVQL-YGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDICEGMAYLERSCYIHR 418

  Fly  1014 DLAARNILVDHNGDGDC-VKISDFGLAQFANSDGYYYAKSKRDIPIRWYSPEAISTCRFSSYSDV 1077
            ||||||.||    ...| |||||||:|::. .|..|.:.|....|::|..||.....::||.|||
Mouse   419 DLAARNCLV----SSACVVKISDFGMARYV-LDDEYISSSGAKFPVKWCPPEVFHFNKYSSKSDV 478

  Fly  1078 WSYGVTLFEMFSRGEEP-----NLVPIQTSQEDFLNRLQSGERLNRPASCPDFIYDLMQLCWHAT 1137
            ||:||.::|:|:.|:.|     ||..::.        :..|.||.||...|..||.:|..|||.|
Mouse   479 WSFGVLMWEVFTEGKMPFENKSNLQVVEA--------ISQGFRLYRPHLAPMTIYRVMYSCWHET 535

  Fly  1138 PRSRPSF 1144
             ..:|.|
Mouse   536 -LQKPVF 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hopNP_511119.2 B41 39..259 CDD:214604
SH2_Jak_family 420..516 CDD:198177
PTK_Jak_rpt1 584..836 CDD:270633 45/238 (19%)
PTKc_Jak_rpt2 886..1155 CDD:270634 97/285 (34%)
TyrKc 894..1151 CDD:197581 96/277 (35%)
TxkXP_036020891.1 SH3_TXK 114..168 CDD:212840 15/79 (19%)
SH2_Tec_Txk 172..277 CDD:198261 23/147 (16%)
PKc_like 295..543 CDD:419665 95/272 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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