DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hop and src-2

DIOPT Version :9

Sequence 1:NP_511119.2 Gene:hop / 32080 FlyBaseID:FBgn0004864 Length:1177 Species:Drosophila melanogaster
Sequence 2:NP_493502.1 Gene:src-2 / 173296 WormBaseID:WBGene00005078 Length:507 Species:Caenorhabditis elegans


Alignment Length:453 Identity:129/453 - (28%)
Similarity:197/453 - (43%) Gaps:89/453 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   712 TKYDPNSYVLDAKISDPGYPRPYRESDSPWIPVKYY---RNLQAAK--TDQFAQLWAFATTIYEI 771
            |.|.|::||...|..:          ..||    |:   |.:.|.|  .....:..||.....| 
 Worm   105 TGYIPSNYVAREKSIE----------SQPW----YFGKMRRIDAEKCLLHTLNEHGAFLVRDSE- 154

  Fly   772 FSRCKEDLS-TLRQEQLLRQKNLDGNILKMLDQD---ICPAPIFETIMDGWSDDETKRFSHHDIF 832
             || :.||| ::|:...::...     ::.||..   |.....|.|:              ||:.
 Worm   155 -SR-QHDLSLSVRENDSVKHYR-----IRQLDHGGYFIARRRPFATL--------------HDLI 198

  Fly   833 SRLNTIKAEILPNYMPP------PEIATNGTGDETVIDRSDIPFLPFPRSNMLMVIPLTSECRVI 891
            :........:..|...|      |:..|....|:..:||..:                    |:|
 Worm   199 AHYQREADGLCVNLGAP
CAKSEAPQTTTFTYDDQWEVDRRSV--------------------RLI 243

  Fly   892 YNMENMIGRGHYGTVYKGHLEFNDKDQPREQVAIKMLNTMQVS-TDFHREIGIMRTLSHPNIVK- 954
                ..||.|.:|.|::|....|      ..||:|.|...... |||..|..||:.|.||.::. 
 Worm   244 ----RQIGAGQFGEVWEGRWNVN------VPVAVKKLKAGTADPTDFLAEAQIMKKLRHPKLLSL 298

  Fly   955 FKYWAEKSHCIIMEYLQSGSFDIYLRFTAPNLNNPRLVSFALDIANGMKYLSDMGLIHRDLAARN 1019
            :.........:|:..|...:...:|:........|:||..:..:|.||.||.:|..|||||||||
 Worm   299 YAVCTRDEPILIVTELMQENLLTFLQRRGRQCQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARN 363

  Fly  1020 ILVDHNGDGDCVKISDFGLAQFANSDGYYYAKSKRDIPIRWYSPEAISTCRFSSYSDVWSYGVTL 1084
            ||::::..   |||:|||||:....:..|.|::....||:|.:|||.:..||::.|||||:|:.|
 Worm   364 ILINNSLS---VKIADFGLARILMKENEYEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILL 425

  Fly  1085 FEMFSRGEEPNLVPIQTSQEDFLNRLQSGERLNRPASCPDFIYDLMQLCWHATPRSRPSFATI 1147
            .|:.:.|..|  .|..|:.| .|.::.:|.|:..||.||..:||:||.||.:.|..||:|.|:
 Worm   426 TEIVTFGRLP--YPGMTNAE-VLQQVDAGYRMPCPAGCPVTLYDIMQQCWRSDPDKRPTFETL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hopNP_511119.2 B41 39..259 CDD:214604
SH2_Jak_family 420..516 CDD:198177
PTK_Jak_rpt1 584..836 CDD:270633 28/132 (21%)
PTKc_Jak_rpt2 886..1155 CDD:270634 94/264 (36%)
TyrKc 894..1151 CDD:197581 92/256 (36%)
src-2NP_493502.1 SH3_Src_like 61..112 CDD:212779 3/6 (50%)
SH2_Src_Src42 120..215 CDD:198233 23/130 (18%)
PTKc_Frk_like 231..496 CDD:270653 97/291 (33%)
Pkinase_Tyr 240..489 CDD:285015 94/282 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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