DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hop and Frk

DIOPT Version :9

Sequence 1:NP_511119.2 Gene:hop / 32080 FlyBaseID:FBgn0004864 Length:1177 Species:Drosophila melanogaster
Sequence 2:NP_001153016.1 Gene:Frk / 14302 MGIID:103265 Length:512 Species:Mus musculus


Alignment Length:453 Identity:129/453 - (28%)
Similarity:198/453 - (43%) Gaps:114/453 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   741 WIPVKYY---RNLQAAKTDQFAQLWAFATTIYEIFSRCKEDLSTLRQEQLLRQKNLDGNI----- 797
            :||..|.   |:||       |:.|.|..     ..|..      .::|||..:|..|..     
Mouse   106 YIPSNYVAEDRSLQ-------AEPWFFGA-----IKRAD------AEKQLLYSENQTGAFLIRES 152

  Fly   798 --------LKMLDQDICPAPIFETIMDGWSDDETKRF-SHHDIFSRLN-------------TIKA 840
                    |.:||:.:........:      ||...| :...:||.||             .:|.
Mouse   153 ESQKGDFSLSVLDEGVVKHYRIRRL------DEGGFFLTRRKVFSTLNEFVNYYTTTSDGLCVKL 211

  Fly   841 E--ILPNYMPPPEIATNGTGDETVIDRSDIPFLPFPRSNMLMVIPLTSECRVIYNMENMIGRGHY 903
            |  .|...:|.|...:..|.|:..|||:.|..|                        ..:|.|.:
Mouse   212 EKPCLKIQVPTPFDLSYKTADQWEIDRNSIQLL------------------------KRLGSGQF 252

  Fly   904 GTVYKGHLEFNDKDQPREQVAIKMLNTMQVS-TDFHREIGIMRTLSHPNIVKFKYWA----EKSH 963
            |.|::|  .:|:    ...||:|.|....:. .||.||..||::|.||.:::.  :|    |...
Mouse   253 GEVWEG--LWNN----TTPVAVKTLKPGSMDPNDFLREAQIMKSLRHPKLIQL--YAVCTLEDPI 309

  Fly   964 CIIMEYLQSGSFDIYLRFTAPNLNNPRL-----VSFALDIANGMKYLSDMGLIHRDLAARNILVD 1023
            .||.|.::.||...||:    |....::     |..|..:|:||.||.....|||||||||:|| 
Mouse   310 YIITELMRHGSLQEYLQ----NDGGSKIHLIQQVDMAAQVASGMAYLESQNYIHRDLAARNVLV- 369

  Fly  1024 HNGDGDCVKISDFGLAQF--ANSDGYYYAKSKRDIPIRWYSPEAISTCRFSSYSDVWSYGVTLFE 1086
              |:.:..|::|||||:.  .:::..|.:|.:..:|::|.:||||.|.:||..|||||:|:.|:|
Mouse   370 --GEHNIYKVADFGLARVFKVDNEDIYESKHEIKLPVKWTAPEAIRTNKFSIKSDVWSFGILLYE 432

  Fly  1087 MFSRGEEP--NLVPIQTSQEDFLNRLQSGERLNRPASCPDFIYDLMQLCWHATPRSRPSFATI 1147
            :.:.|:.|  .:...|..|     .|....||.:|::||...|.:|..||:..|:.||:|.|:
Mouse   433 IITYGKMPYSGMTGAQVIQ-----MLSQNYRLPQPSNCPQQFYSIMLECWNVEPKQRPTFETL 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hopNP_511119.2 B41 39..259 CDD:214604
SH2_Jak_family 420..516 CDD:198177
PTK_Jak_rpt1 584..836 CDD:270633 23/111 (21%)
PTKc_Jak_rpt2 886..1155 CDD:270634 92/276 (33%)
TyrKc 894..1151 CDD:197581 92/268 (34%)
FrkNP_001153016.1 SH3_Src_like 54..111 CDD:212779 2/4 (50%)
SH2_Src_Frk 119..214 CDD:199831 22/118 (19%)
PTKc_Frk_like 232..501 CDD:270653 98/303 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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