DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hop and lck

DIOPT Version :9

Sequence 1:NP_511119.2 Gene:hop / 32080 FlyBaseID:FBgn0004864 Length:1177 Species:Drosophila melanogaster
Sequence 2:XP_012812855.2 Gene:lck / 100497656 XenbaseID:XB-GENE-6054021 Length:503 Species:Xenopus tropicalis


Alignment Length:522 Identity:137/522 - (26%)
Similarity:213/522 - (40%) Gaps:118/522 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   694 LEDNKIIHNYIRCSNLYVTKYDP------------NSYVLDAKISDPGY-PRPYRESDSPWIPVK 745
            |.||.::..|         .|:|            ..:||:.|  |..: .:..|.....:||..
 Frog    55 LHDNLVVALY---------NYEPMHDEDLGFEAGEKLHVLEQK--DEWWKAKSLRTGQVGYIPYN 108

  Fly   746 YYRNLQAAKTDQFAQLWAFATTIYEIFSRCKEDLSTLRQE-QLLRQKNLDGNILKMLDQDICPAP 809
            :..::...:    :::|.|            .||.....| |||...|..|:.|.          
 Frog   109 FVASVNGIE----SEMWFF------------RDLGRKDAERQLLAPGNQQGSFLV---------- 147

  Fly   810 IFETIMDGWSDDETKRFSHHDIFSRLNTIKAEILPNYMPPPEIATNGTGDETVIDRSDIPFLP-- 872
                     .:.||.:.|:......|:..:.|::.:|    :|.....|...:..|.....|.  
 Frog   148 ---------RESETTKGSYSLSVRDLDQNQGEVVKHY----KIRNLDNGGFYISPRKTFQTLQEL 199

  Fly   873 ---FPRSNMLMVIPLTSEC-----------------RVIYNMENMIGRGHYGTVYKGHLEFNDKD 917
               :.||:..:...|...|                 |....:...:|.|.:|.|:.|:...:.| 
 Frog   200 VQHYRRSSDGLCTLLKEPCQTQRPQKPWWADEWEIPRNKLQLVKKLGAGQFGEVWMGYYNGHTK- 263

  Fly   918 QPREQVAIKMLNTMQVSTD-FHREIGIMRTLSHPNIVKFK-YWAEKSHCIIMEYLQSGSFDIYLR 980
                 ||||.|....:|.: |..|..:|:.|.||.:|:.. ...::...|:.||::.|....||:
 Frog   264 -----VAIKSLKPGTMSPEAFLAEANLMKQLQHPRLVRLNAVVTQEPIYIVTEYMEKGCLVDYLK 323

  Fly   981 FTAPNLNNP--RLVSFALDIANGMKYLSDMGLIHRDLAARNILVDHNGDGDCVKISDFGLAQFAN 1043
             |:..|...  :|:..:..:|.||.:|.....|||||.|.||||   .:..|.||:|||||:.. 
 Frog   324 -TSEGLKLTIYKLIDMSAQVAEGMAFLEHKNYIHRDLRAANILV---SESLCCKIADFGLARVI- 383

  Fly  1044 SDGYYYAKSKRDIPIRWYSPEAISTCRFSSYSDVWSYGVTLFEMFSRGEEPNLVPIQTSQEDFLN 1108
            .|..|.||.....||:|.:||||:...|:..|||||:||.|.|:.:.|..|  .|..|:.| .:.
 Frog   384 VDNEYTAKEGAKFPIKWTAPEAINYGTFTIKSDVWSFGVLLTEIVTYGRIP--YPGMTNPE-VIE 445

  Fly  1109 RLQSGERLNRPASCPDFIYDLMQLCWHATPRSRPSF----ATIVDIITREVATKVTHPTDG-HQS 1168
            .|:.|.|:.:|.:||..:|:||..||...|..||:|    :.:.|..|         .|:| :||
 Frog   446 NLERGYRMPQPDNCPMELYELMLRCWKEEPEERPTFEFLRSLLEDFFT---------ATEGPYQS 501

  Fly  1169 PP 1170
            .|
 Frog   502 QP 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hopNP_511119.2 B41 39..259 CDD:214604
SH2_Jak_family 420..516 CDD:198177
PTK_Jak_rpt1 584..836 CDD:270633 27/155 (17%)
PTKc_Jak_rpt2 886..1155 CDD:270634 95/293 (32%)
TyrKc 894..1151 CDD:197581 92/264 (35%)
lckXP_012812855.2 SH3_Lck 59..112 CDD:212938 10/63 (16%)
SH2_Src_family 117..217 CDD:199827 24/138 (17%)
PTKc_Lck_Blk 231..494 CDD:270652 94/285 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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