DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pa1 and pagr1

DIOPT Version :10

Sequence 1:NP_572712.1 Gene:Pa1 / 32079 FlyBaseID:FBgn0287454 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_001313618.1 Gene:pagr1 / 326076 ZFINID:ZDB-GENE-030131-4801 Length:273 Species:Danio rerio


Alignment Length:111 Identity:34/111 - (30%)
Similarity:52/111 - (46%) Gaps:21/111 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ELEGYYLMLEAGNIPELQW-QFPGR-----RAPSPEAGSGGNSKELEQATDAIEQEPQKA---ND 76
            |::..|.:|..|...|||| ..|.|     |.|||| |.|.::::..|     ||..:||   .:
Zfish   109 EIKRLYELLAKGEELELQWVPLPRRPPTPPRTPSPE-GDGDDTQDHTQ-----EQAERKALTPTE 167

  Fly    77 FDFSDD---VAPTQ---MRVRSQTSTPKSAKKKTANFAGVMETLKK 116
            |||.::   ..|..   .|.|:..|:.:|..|:.|....|:..:|:
Zfish   168 FDFDEEQTLATPKNSFLTRRRTPGSSARSTVKREARLDKVLSDMKR 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pa1NP_572712.1 PAXIP1_C 18..116 CDD:464674 33/109 (30%)
pagr1NP_001313618.1 PAXIP1_C 88..221 CDD:464674 34/111 (31%)

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