DRSC/TRiP Functional Genomics Resources

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Protein Alignment NdufV3 and Ndufv3

DIOPT Version :10

Sequence 1:NP_572710.1 Gene:NdufV3 / 32076 FlyBaseID:FBgn0030292 Length:109 Species:Drosophila melanogaster
Sequence 2:NP_072129.2 Gene:Ndufv3 / 64539 RGDID:621020 Length:458 Species:Rattus norvegicus


Alignment Length:92 Identity:23/92 - (25%)
Similarity:41/92 - (44%) Gaps:19/92 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KGGPVSGG--GRPSASGSPAGAG--SSPSGGASSPSVVGLTSNCVKPSSGPVGPGASATGGYKVP 80
            :.||...|  ..|:....|..||  ....|....|::|               |.:|.|..||..
  Rat   375 RAGPQLEGTFQAPAGEAPPTDAGPPQEAPGDTQEPTLV---------------PESSDTTTYKNL 424

  Fly    81 EYYSFNRFSYAEAEVEMAKYRCPQPSA 107
            :::.:|.|::.:..::::|:|.||||:
  Rat   425 QHHEYNAFTFLDLNLDLSKFRLPQPSS 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NdufV3NP_572710.1 NDUFV3 77..107 CDD:464921 9/29 (31%)
Ndufv3NP_072129.2 PTZ00121 <168..>355 CDD:173412
NDUFV3 417..451 CDD:464921 10/33 (30%)
Blue background indicates that the domain is not in the aligned region.

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