DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GCS1 and Mogs

DIOPT Version :9

Sequence 1:NP_001245621.1 Gene:GCS1 / 32073 FlyBaseID:FBgn0030289 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_113937.2 Gene:Mogs / 78947 RGDID:69240 Length:834 Species:Rattus norvegicus


Alignment Length:887 Identity:362/887 - (40%)
Similarity:477/887 - (53%) Gaps:113/887 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ARNTGSSSGSTPAASSSGSSAAAAAAAAAAAAAASNAKQKQRSPRFSLSSNLILDKWKTMIGCVC 66
            ||..|...|.  |..:.||:..||.|....|.|            |.||...:| .|..:...:.
  Rat    22 ARGAGRRDGR--AGGARGSAGGAALAVVVLALA------------FGLSGRWVL-AWLRVRRALT 71

  Fly    67 LAIASYFGYLGYLETRVNTPFDHQKMVVHAGLEQPDRYWGSYRPLTYFGMKTRDPHSLVMGLMWY 131
            |..|.           ...|.|.....|     .|:.:||:|||..|||||||.|..|:.||||.
  Rat    72 LHPAP-----------SALPPDSSSPAV-----APELFWGTYRPHVYFGMKTRSPKPLLTGLMWA 120

  Fly   132 -------TPSNLGPGGQGIRHWCEQGDKLDSYGWTHHDGRSFGVQEIQDLPFELKTSFVKYPEGK 189
                   ||..|       ||.|||||.:..|||..|||.|||.|.|.|....|.|.||| ..|.
  Rat   121 QQGATPGTPPKL-------RHTCEQGDGVGPYGWEFHDGLSFGRQHIYDGALRLTTEFVK-RSGG 177

  Fly   190 QYGGDWTARISVRNTTRAWDK--SISLIWYVALDER--------TNGHIKYVSDDKSPEPGVYGE 244
            .:||||:.|::|.........  .:||.:||..|.:        ..|.:|::|          |.
  Rat   178 HHGGDWSWRVTVEPQASGTPSFPLVSLFFYVVTDGQEVLLPEVGAKGQLKFIS----------GH 232

  Fly   245 AQGLGEFQVRF--HAVKGKIL--HKSY--LSTVAPSLAKLKDTLFSHFRAFADKR-----GNRFI 298
            ...||:|::..  ....|..:  |.||  ..:..|.|..|.|.:.||..::...|     ..|::
  Rat   233 TSELGDFRLTLLPPTTPGDTVPKHGSYNVFWSSNPGLPLLTDMVKSHLNSWFHHRPPGASPERYL 297

  Fly   299 GLPGEIVSQNGLPSSNPEPNFIAIQITAEVDFTLDITYQSTSGFSLGESIPKPPTGRAYQDSLQA 363
            ||||.:..:...||.  :..|:..|:|.:..|:::..::|.|..:..:...:...|.....:|::
  Rat   298 GLPGSLKWEERGPSG--QGQFLVQQVTLKAPFSVEFVFESGSARTGRDQASEQLVGGQLTRALES 360

  Fly   364 KIAQFEQRFEDRFQLKQKGHSPEEVRFARNALSNLLGGIGYFYGSSRV-------QSVYTKNPVP 421
            ..|.|::|||..||||:||.||||....:.|||.||||||||||...|       .|....:|..
  Rat   361 HAAAFKERFERTFQLKEKGLSPEEQALGQVALSGLLGGIGYFYGQGLVLPDTGMEGSEQKMDPSL 425

  Fly   422 YWKAPLYTAVPSRSFFPRGFLWDEGFHGLLISAWDIDIELDIICHWFDLLNVEGWIPREQILGVE 486
            :...||::.||||||||||||||||||.|::..||..:..:.:.||..|||.:|||.||||||.|
  Rat   426 FPPVPLFSGVPSRSFFPRGFLWDEGFHQLVVQRWDPHLTREALGHWLGLLNADGWIGREQILGDE 490

  Fly   487 ALAKVPEEFVTQRNSNANPPTFFLTLKKLLTSHRAELSQNGRLATLERLYPRVQAWFNWFNTTQR 551
            |.|:||.||:.||.::|||||..|.:..:|.....|     .||.|.|.:||:.|||:|.:.:|.
  Rat   491 ARARVPPEFLVQRAAHANPPTLLLPVIHMLEGRAPE-----DLAFLRRAFPRLHAWFSWLHQSQA 550

  Fly   552 GEVLGTYLWRGRNATTTRELNPKSLSSGLDDYPRASHPTDKERHLDLRCWIALAAGVMAELSTLL 616
            |.|..:|.||||:......||||:|.||||||||||||:..|||||||||:.|.|.|:::|:..|
  Rat   551 GPVPLSYRWRGRDLALPTLLNPKTLPSGLDDYPRASHPSAAERHLDLRCWVTLGARVLSQLAEEL 615

  Fly   617 GKDD--AKYYETASYLTDNVRLNRLHLAPYSEQYADWGLHTDQVKLK-RPPSMAPQQQQRHHHQH 678
            |:.:  |:....|:.|.....|:.||.||....:||:|.||..|:|| |||.             
  Rat   616 GETEAAAELGPLAASLEAAGSLDELHWAPELGVFADFGNHTKAVQLKSRPPQ------------- 667

  Fly   679 YQLPEMQRVTGE-LPTYQFVDSAFGYVSLFPLLLEQLDHDSPYLTKLLNDLRDPEQLWTNYGLRS 742
                .:.||.|. .|..|:|| |.||||||||||:.|:..||.|..||:.|.|...||:.:||||
  Rat   668 ----GLVRVVGRPPPRLQYVD-ALGYVSLFPLLLQLLEPSSPRLGPLLDVLADSRHLWSPFGLRS 727

  Fly   743 LSKRSPLYMQRNTEHDPPYWRGPIWININYLAAKALHHYGKIDGPNAALARQIYAELRDNLVGNI 807
            ||..|..|.|||||||||||||.:|:||||||..||||||:::||:...|.::|.|||.|:|.|:
  Rat   728 LSASSLFYKQRNTEHDPPYWRGAVWLNINYLALGALHHYGRVEGPHKVQAAKLYRELRANVVSNV 792

  Fly   808 LRQYKRSGYLWEQYDDTSGEGKGCNPFTGWTATVVLLMAEQF 849
            .:||:.:|:|||||.|..|.|.||.||.|||:.|:|:|||::
  Rat   793 RQQYQATGFLWEQYSDQDGRGMGCRPFQGWTSLVLLIMAEEY 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCS1NP_001245621.1 Glyco_hydro_63N 104..283 CDD:293528 72/201 (36%)
Glyco_hydro_63 352..847 CDD:281228 249/505 (49%)
MogsNP_113937.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 5/16 (31%)
Endoplasmic reticulum targeting 3..9
Required for endoplasmic reticulum targeting. /evidence=ECO:0000250 74..136 28/84 (33%)
Glyco_hydro_63N 92..>260 CDD:407154 67/185 (36%)
Glyco_hydro_63 349..832 CDD:397353 249/505 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352388
Domainoid 1 1.000 473 1.000 Domainoid score I420
eggNOG 1 0.900 - - E1_KOG2161
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4593
Inparanoid 1 1.050 592 1.000 Inparanoid score I943
OMA 1 1.010 - - QHG53903
OrthoDB 1 1.010 - - D162821at33208
OrthoFinder 1 1.000 - - FOG0004064
OrthoInspector 1 1.000 - - otm45234
orthoMCL 1 0.900 - - OOG6_103455
Panther 1 1.100 - - O PTHR10412
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2818
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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