DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34348 and Lpgat1

DIOPT Version :9

Sequence 1:NP_001096954.1 Gene:CG34348 / 32072 FlyBaseID:FBgn0085377 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_038947017.1 Gene:Lpgat1 / 679692 RGDID:1585897 Length:407 Species:Rattus norvegicus


Alignment Length:21 Identity:9/21 - (42%)
Similarity:10/21 - (47%) Gaps:0/21 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 IFRTFFMRLYNKVRIPVYPIY 255
            :.|..||...|.|.||.|..|
  Rat    56 LMRFAFMVANNLVAIPSYICY 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34348NP_001096954.1 PlsC 47..271 CDD:223282 9/21 (43%)
LPLAT_MGAT-like 90..298 CDD:153249 9/21 (43%)
Lpgat1XP_038947017.1 LPLAT_LCLAT1-like 106..322 CDD:153252
Acyltransf_C 311..>366 CDD:406475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.