DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34348 and Agpat3

DIOPT Version :9

Sequence 1:NP_001096954.1 Gene:CG34348 / 32072 FlyBaseID:FBgn0085377 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_443747.2 Gene:Agpat3 / 28169 MGIID:1336186 Length:376 Species:Mus musculus


Alignment Length:189 Identity:35/189 - (18%)
Similarity:55/189 - (29%) Gaps:76/189 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 LIYTIGDRF---------------------LFKLPGWGTISEAFHVSPGTVQSCVSIL------R 175
            |:|..|.||                     ...||.....:.|.....|||.:...:.      :
Mouse   172 LLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTAVQCLRGTVAAIYDVTLNFRGNK 236

  Fly   176 DGNLLAISPGGVYEAQF-----------GDHYYELLWRNRVGFAKVAIEAKAPIIPCFTQNLREG 229
            :.:||.|..|..|||..           .|......|.:::...|.|              |:|.
Mouse   237 NPSLLGILYGKKYEADMCVRRFPLEDIPADETSAAQWLHKLYQEKDA--------------LQEM 287

  Fly   230 FRQVGIFRTFFMRLYNKVRIP-------------VYPIY--------GGFPVKFRTYLG 267
            ::|.|:|..   ..:...|.|             :.|::        .|.|:...|:||
Mouse   288 YKQKGVFPG---EQFKPARRPWTLLNFLCWATILLSPLFSFVLGVFASGSPLLILTFLG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34348NP_001096954.1 PlsC 47..271 CDD:223282 35/189 (19%)
LPLAT_MGAT-like 90..298 CDD:153249 35/189 (19%)
Agpat3NP_443747.2 PLN02380 12..325 CDD:178006 30/169 (18%)
HXXXXD motif. /evidence=ECO:0000305|PubMed:19114731 96..101
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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