DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gapvd1 and ankrd27

DIOPT Version :10

Sequence 1:NP_572704.1 Gene:Gapvd1 / 32070 FlyBaseID:FBgn0030286 Length:1712 Species:Drosophila melanogaster
Sequence 2:XP_073799530.1 Gene:ankrd27 / 386887 ZFINID:ZDB-GENE-121105-1 Length:1063 Species:Danio rerio


Alignment Length:454 Identity:99/454 - (21%)
Similarity:164/454 - (36%) Gaps:127/454 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1295 FGTHYCDTSEDI--------LAKYRRKVSSSSEATNSDSTGNGHGV------GS--TGSVGAAAH 1343
            ||||.....|:|        |.|:|..:.|        .....||:      ||  |||..||  
Zfish    34 FGTHMAVYDENILKNPFYQALEKHRPDLCS--------RVAELHGIILVPCCGSLPTGSFTAA-- 88

  Fly  1344 LHKHMNGGHIPGVVFGCVKQKLRTVLSRTDLHSGDFRQTSTTSTTMATPLQIYLQIQLAQCISLQ 1408
                    ...|.|....:|..:||         |.::.|..:.      :::|...|...||:.
Zfish    89 --------QFDGYVLQPSEQGYQTV---------DGKEVSINNN------RVHLSAGLPNPISVP 130

  Fly  1409 RLPQISHVAE-----ALRCLAQLERPQHGQLLAELQRDLERRQSYLQYLMRHRQQLLLRSEQLEQ 1468
            .|.:.:...|     ::.|:|:.....|                             :.:|:|..
Zfish   131 ILFEETFYNEKEQAYSILCIARPFESDH-----------------------------IPAEELGS 166

  Fly  1469 LEARLRGEARSSQRCLLQAL-VRMYLAWSRQQEKLEQFQAEFAQLRASDERVELTEEF------- 1525
            :.|         ..||.... ||.:|  .|..|||::|.:.|.......||..|....       
Zfish   167 VPA---------PYCLKNIEDVREFL--GRHAEKLDKFVSAFCLSFKEQERKGLRHHIDSVNTLY 220

  Fly  1526 ---VESLLQELRSSADLQDEWQVDAARVAIERMLLEQMYEQVMFPNEDADVSRDEVLSAHIGKLQ 1587
               ::.||::.|.....:.|.|:...:.|:|..:...:::.:.......:.|||...:.....||
Zfish   221 TRCLQCLLRDSRLKLLARQEIQMTLLKEAVEMYIHHGIHDLLFSYVGTLEASRDAAFNKTTRSLQ 285

  Fly  1588 RFVHPAHPALCIAQEYLG---EAPWTF--AQQQLCHMAAYKTPREKLQCIINCISSIMSLLRMSS 1647
            .          :.|:.||   |...|.  |:::|..:....:|::||.||...|.:||...|...
Zfish   286 D----------LQQKELGVKSEFSITIPRAKRELIQLNVCTSPQQKLLCIRKVILTIMQSTRRRD 340

  Fly  1648 GRVP----AADDLLPVLIYVVIMANPPYLLSTVEYISCFLGKKLEGEDEFYW--TLFGSVVKFI 1705
            ..|.    .|||||.|::|::|....|..::.:.||..|..:. ..:||..:  |.|.:.|::|
Zfish   341 TAVSIESMCADDLLLVILYLLIKTEIPNWMANLSYIKHFRFRS-SSKDELSYCLTSFEAAVEYI 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gapvd1NP_572704.1 RasGAP_RAP6 90..460 CDD:213331
MSCRAMM_ClfA <546..910 CDD:468110
YhaN 1412..>1540 CDD:443752 24/143 (17%)
VPS9 1609..1709 CDD:460489 31/105 (30%)
ankrd27XP_073799530.1 None
Blue background indicates that the domain is not in the aligned region.

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