DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Gapvd1 and Vps9d1

DIOPT Version :9

Sequence 1:	NP_572704.1	Gene:	Gapvd1 / 32070	FlyBaseID:	FBgn0030286	Length:	1712	Species:	Drosophila melanogaster
Sequence 2:	XP_006255829.1	Gene:	Vps9d1 / 307923	RGDID:	1565149	Length:	648	Species:	Rattus norvegicus

Alignment Length:	263	Identity:	58/263 - (22%)
Similarity:	97/263 - (36%)	Gaps:	77/263 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly  1500 EKLEQFQAEFAQLRASDERVELTEEFVESLLQELRSSA-DLQDEWQVDAARVAIERML------- 1556
            |.||||.|.........:|        |.||:.|:|:. |:.:         ||:|:|
  Rat   402 EDLEQFLAMSEPQTPGAKR--------EPLLECLKSTVKDIHN---------AIDRLLSLTLLAF 449

  Fly  1557 ---------------LEQMYEQVMFP-----------NEDADVSRD-----EVLSAHIGKLQRFV 1590
                           :|:.:...::|           ..:|.|||.     ..|...:|
  Rat   450 ESLNTATCKDRCLACIEEPFFSPLWPLLLALYRSVHRTREAAVSRSMELYRNALPTALG------ 508

  Fly  1591 HPAHPALCIAQEYLGEAPWTFAQQQLCHMAAYKTPREKLQCIINCISSI---------MSLLRMS 1646
            .|.....|:.:......|:..|.|:|..:.....|::||:||:..:..|         ....|..
  Rat   509 IPTKLLPCVPEAQASTYPYCTAAQELGLLVLESCPQKKLECIVRTLRVICICAEDYCRAQEARPE 573

  Fly  1647 SGRVP-----AADDLLPVLIYVVIMANPPYLLSTVEYISCFLGK-KLEGEDEFYWTLFGSVVKFI 1705
            .|..|     .||||||:|.:||:.:..|.|:|....:..|..: .|.||:.:..|...|.:.::
  Rat   574 GGSQPPAAAIGADDLLPILSFVVLRSGLPQLVSECAALEEFTHEGYLIGEEGYCLTSLQSALSYV 638

  Fly  1706 KTM 1708
            :.:
  Rat   639 ELL 641

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Gapvd1	NP_572704.1	RasGAP_RAP6	90..460	CDD:213331
Gapvd1	NP_572704.1	VPS9	1609..1709	CDD:280383	30/115 (26%)
Vps9d1	XP_006255829.1	VPS9	527..642	CDD:280383	30/115 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG2319
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810