DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXA11 and HGTX

DIOPT Version :10

Sequence 1:NP_005514.1 Gene:HOXA11 / 3207 HGNCID:5101 Length:313 Species:Homo sapiens
Sequence 2:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster


Alignment Length:355 Identity:87/355 - (24%)
Similarity:129/355 - (36%) Gaps:80/355 - (22%)


- Green bases have known domain annotations that are detailed below.


Human     8 PCSSNMY---LPSCTY-YVSGPDFSSLPSF-LPQTPSSR--PMTYSYSSNLPQVQPVREVTFREY 65
            |.||.::   .||..| :.|.|...|..|: |.|..|..  |...|.|:: |..|...:.:....
  Fly   185 PASSRLHSDSSPSPRYEHNSSPGVDSAKSYALSQRSSGAEDPCQTSESAS-PPPQGQNDYSPENL 248

Human    66 AIEPATKWHPRG-------NLAH-----CYSAEELVHRD------CLQAPSAA-----------G 101
            :.:.|...|..|       |..|     |::...  |.|      .|..|.||           |
  Fly   249 SSQRAKFQHHHGVNPLALHNANHAGNPGCHNNNN--HMDHKLPLSFLGPPLAALHSMTTEMKGQG 311

Human   102 VPGDVLAKSSANVYHHPTPAVSSNFYSTVGRNGVLPQAFDQFFETAYGTPENLASSDYPGDKSAE 166
            |.|...:.:..:..|.|    :|:..|..|..|    :......|...|....|.:.:..|....
  Fly   312 VGGSSASANGLSYSHSP----NSHLISDRGSGG----SSSSSSTTTTNTNSQGAPNPHGIDTILS 368

Human   167 KGPPAATATSAA-----------AAAAATGAPATSSSDSGGGGGCRETAA--------------- 205
            |.||..:|..:|           |||||..|...|.|.    |...:|.|               
  Fly   369 KPPPVTSAGLSALTGAGIPRFSIAAAAAGMAQYLSQSQ----GAPLKTHAGHIVDRTHLYWPGLQ 429

Human   206 --AAEEKERRRRPESSSSPESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINK 268
              .|.....|.|..::.|...|..|....:....|:: :..|..::..||..||:.|..:.|:..
  Fly   430 GLVANPIAWRERLSNTMSANLSQSHQHHPSNDKDGKK-KHTRPTFSGQQIFALEKTFEQTKYLAG 493

Human   269 EKRLQLSRMLNLTDRQVKIWFQNRRMKEKK 298
            .:|.:|:..|.:::.|||:||||||.|.:|
  Fly   494 PERAKLAYALGMSESQVKVWFQNRRTKWRK 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA11NP_005514.1 DUF3528 25..153 CDD:432284 34/159 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..246 25/119 (21%)
Homeodomain 242..298 CDD:459649 20/55 (36%)
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 48/213 (23%)
Homeodomain 465..523 CDD:459649 20/58 (34%)

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