DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXA11 and ind

DIOPT Version :10

Sequence 1:NP_005514.1 Gene:HOXA11 / 3207 HGNCID:5101 Length:313 Species:Homo sapiens
Sequence 2:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster


Alignment Length:300 Identity:74/300 - (24%)
Similarity:122/300 - (40%) Gaps:89/300 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    30 LPS--FLPQTPSSRPMTYSYSSNLPQVQPVREVTFREYAIEPATKWHPRGNLAHCYSAEELVHRD 92
            |||  .||. |:|...:|.:|..:.|.|..::          ..:.|.....|...:|..|    
  Fly    43 LPSIPMLPY-PASYVGSYLFSLGIQQQQQQQQ----------QQQQHAAAAAAAAAAAAAL---- 92

Human    93 CLQAPSAAGVPGDVLAKSSANVYH---------------------HPTPAVSSNFYSTVGRNGVL 136
             .|.|..:..||        ::||                     :|:|.:|:|     ..:..|
  Fly    93 -QQHPHVSSSPG--------SLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSAN-----PNSQQL 143

Human   137 PQAFDQFFETAYGTPENLASSDYPGDKSAEKGPPAATATSAAAAAAATGAPATSSSDSGGGGGCR 201
            |.     ....||:|. :.....|        .|.:..||.:|:::|: ...|::.|        
  Fly   144 PP-----IHNLYGSPV-VGGLPLP--------EPGSFCTSPSASSSAS-LDYTNNFD-------- 185

Human   202 ETAAAAEEKERRRRPESSSSPESSSGHTEDKAG--------GSSGQRTRKKRCPYTKYQIRELER 258
                  |.:.:|.:.|||.||.||........|        ......:::.|..:|..|:.||||
  Fly   186 ------EPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELER 244

Human   259 EFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKK 298
            ||..:.|:::.:|::::..|.|:::||||||||||:|:||
  Fly   245 EFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXA11NP_005514.1 DUF3528 25..153 CDD:432284 30/145 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..246 18/99 (18%)
Homeodomain 242..298 CDD:459649 24/55 (44%)
indNP_996087.2 Homeodomain 228..284 CDD:459649 24/55 (44%)

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