DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir10a and Ir7f

DIOPT Version :9

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_001138177.1 Gene:Ir7f / 7354418 FlyBaseID:FBgn0259188 Length:621 Species:Drosophila melanogaster


Alignment Length:561 Identity:118/561 - (21%)
Similarity:213/561 - (37%) Gaps:99/561 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 GRR--NLVLVMSLDQLL-TNRGAA-APIQKASTFFYILADQDKDLSADEQLRLEGSCRQLWTQHK 143
            ||:  :|::|.|...|| ||..|: |.......:|..|..:|..:..:.||.|:......|....
  Fly   108 GRKRVSLLMVDSYQGLLDTNITASNANFDDPDYYFIFLQARDHLIPKELQLILDHCLAHFWLHCN 172

  Fly   144 VYNRFFLTRDGVWIYDPFKRR--DSAF--------GRLVRYYGSETL-DKLLFRDMAGYPLRI-- 195
            |..:.......|:.|.|:...  ..|:        ||  ::..|:.. |||  ..|.|.||.:  
  Fly   173 VMIQTAQVEVLVYTYYPYTADACQKAYPIPVNTFDGR--KWKASQMFPDKL--SQMHGCPLTVLT 233

  Fly   196 ---QMFRSVYTRPEFDKETGLLTRVTGVDFLVAQMLRERLNFTM-----LLQQPEKKYFGERSAN 252
               ..|..:...|:.::..|     :|.:..:.:.|..|:||::     .|.:|.    ..|.|.
  Fly   234 WHQPPFVELVWDPKHNRSRG-----SGFEIQLVEHLARRMNFSLELVNIALLRPN----AYRLAE 289

  Fly   253 GSYNGAIGSIIKDGLDICLTGFFVKDYLVQQYMDFTVAVYDDEL-CIYVPKASRIPQSILPIFAV 316
            ||..|.|..:::..::|.: |:|.|.....|.:...::.|...| .:...:..||....|.:|..
  Fly   290 GSSEGPIEKLLQRNVNISM-GYFRKTARRNQLLTTPMSYYSANLVAVLQLERYRIGSLALLVFPF 353

  Fly   317 GYDIWLGFVLTAFACALIWLTLRVINLKLRIVSL--GNQHIVGQALGIMVDTWVVWVRLNLSHLP 379
            ...:|:          |:.|.| :|:|.:.:.|.  ||:...|..|.::    .:.:...|:.||
  Fly   354 ELSVWM----------LLLLAL-LIHLGIHLPSARRGNEEDGGGGLQVV----ALLLGAALARLP 403

  Fly   380 ASYAERMFIGTLCLVSVIFGAIFESSLATVYIHPLYYKDINTMQELDESGL---------KVVYK 435
            .|:..|.........|:.....::|.|..:....||.....::.:|...|.         :::.:
  Fly   404 RSWRHRFIAAHWLWASIPLRISYQSLLFHLIRLQLYNTPSFSLDQLLAEGFQGICTANTQRLLLE 468

  Fly   436 YSSMADDLFFSETSPLFASLNKKLSWNRDLRADVIDEVARFRNK-----AGVSRYTSLILESSH- 494
            ...:|.|      .....|::....|      ||::.:.|.||:     |......|.:..|:| 
  Fly   469 MPQLARD------PDSIQSVDTPFDW------DVLNVLTRNRNRKIFAVANQDVTLSFLHSSAHP 521

  Fly   495 --FTLLRKIWVVPECPKYYTISYVMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRS 557
              |.::::...|.....|      ||:.|...:.::..:.|...:|.|..|.:...:.|..|.:.
  Fly   522 NAFHVVKQPVNVEYAGMY------MPKHSFLYEKMDDDIRRLDASGFIHAWRRASFASVHRKEQV 580

  Fly   558 NILEADAESELVRVLTIGDLQLAFYVVIGGNLLAFLGFLAE 598
            ::...       |.:....|...:.|:.|..|||.|.|..|
  Fly   581 HMTSR-------RYINHAKLSGIYMVMAGLYLLAGLLFAGE 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 18/78 (23%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 19/97 (20%)
Lig_chan 319..587 CDD:278489 51/286 (18%)
Ir7fNP_001138177.1 Periplasmic_Binding_Protein_Type_2 231..>358 CDD:304360 27/136 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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