DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir10a and Ir94d

DIOPT Version :9

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster


Alignment Length:619 Identity:120/619 - (19%)
Similarity:239/619 - (38%) Gaps:151/619 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 WFLLRTEIPLSIVTYQENR----YWMDDPFGRRNLVLVMSLD--------------QLLTNRGAA 103
            |..:..::|:|::..:|:.    ..:::|  ..|::.:..::              ::|..:...
  Fly    48 WLDILWQLPVSVLQIKEHSRETYSLLENP--SHNVLTIAFVNDSPEDILEILYRNLRMLNTQPVL 110

  Fly   104 APIQKASTFFYILADQDKDLSADEQLRLEGSCRQLWTQHKVYNRFFLTRDG-----VWIYDPF-- 161
            ..|:|::                  :|:.......| .|::.....:.:|.     |:.|:||  
  Fly   111 LVIRKST------------------IRVNSLLEWCW-HHQLLKVVAIAQDFMESLIVYSYNPFPV 156

  Fly   162 -----KRRDSAF----GRLVRYYGSETLDKLLFRDMAGYPLRIQMFRSVYTRPEFDKETGLLTRV 217
                 :|.|::.    .||...:|.|....|     .|...|:.::|.:..:..|....|     
  Fly   157 LQFIERRLDNSTVIFEKRLENLHGYEVPIAL-----GGSSPRLIVYRDLEGKLIFSGPVG----- 211

  Fly   218 TGVDFLVAQMLRERLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDICLTGFFVKDYLVQ 282
               :|:  :...:|.|..::  ||   |..:.||.......|.|:....:.|.|...:.:     
  Fly   212 ---NFM--KSFEQRYNCRLV--QP---YPFDESAISPARDLIASVQNGSVQIALGAIYPQ----- 261

  Fly   283 QYMDFTVAVYDDEL---CIYVPKASRIPQSIL--PIFAVGYDIWLGFVLTAFACALIWLTLRVIN 342
              :.:|...|..||   |:.:|....:|.|.|  .:|:.     :.|.:|..|..||.|||   :
  Fly   262 --VPYTGYSYPIELMSWCLMMPVPEEVPHSQLYSMVFSP-----MAFGITIVAMVLISLTL---S 316

  Fly   343 LKLRI----VSLGNQHIVGQAL-GIMVDTWVVWVRLNLSHLPASYAERMFIGTLCLVSVIFGAIF 402
            :.||:    ||.....:....| |::..::...:|     .|| ..:.|:: .:||:.::..:.:
  Fly   317 MALRLHGYRVSFSEYFLHDSCLRGVLSQSFYEVLR-----APA-LIKAMYL-VICLLGLLITSWY 374

  Fly   403 ESSLATVYIHPLYYKDINTMQELDESGLKVVY---KYSSMADDLFFSETSPLFASLNKKLSWNRD 464
            .|..:|.......:..:.:.:.:..|.:|:|.   :|..:   |||||....::|:.:       
  Fly   375 NSYFSTFVTSAPRFPQLTSYESIRHSNIKIVIWKPEYEML---LFFSENMEKYSSIFQ------- 429

  Fly   465 LRADVIDEVARFRN-------------KAGVSRYTSLILESSHFTLLRKIWVVPECPKYYTISYV 516
            |:.| ..|....|:             |..:.:....:..|..|:|...:.|      ::|:..|
  Fly   430 LQED-YKEFLHLRDSFDTRYGYMMPMEKWSLMKEQQRVFSSPLFSLQDDLCV------FHTVPIV 487

  Fly   517 MP--RDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRSNILEADAESELVRVLTIGDLQL 579
            .|  ::|.:::..:.|:|.....||:.:| :|......||.....||.....:..|.:.:||| :
  Fly   488 FPMVKNSIFKEPFDRLILDVTATGLLSRW-RDMSFTEMIKAGQLGLEDRGHPKEFRAMKVGDL-I 550

  Fly   580 AFYVVIGGNL-LAFLGFLAE------HFRWKLQK 606
            ..:..:|..| ||.:.||.|      |..|:..|
  Fly   551 QIWRFVGWMLGLATIVFLLELICFWRHKMWQNMK 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 14/73 (19%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 22/100 (22%)
Lig_chan 319..587 CDD:278489 59/290 (20%)
Ir94dNP_001138099.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.