DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and grid2

DIOPT Version :10

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:501 Identity:97/501 - (19%)
Similarity:174/501 - (34%) Gaps:144/501 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 DKLLFRDMAGYPLR---------IQMFRSVYTRPEFDKETGLLTRVTGVDFLVAQMLRERLNFTM 236
            |:.|..:|.|..||         :.:..:|..:|:         :..|....|...|...|.|..
Zfish   431 DRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPK---------KYQGFSIDVLDALANYLGFKY 486

  Fly   237 -LLQQPEKKYFGERSANGSYNGAIGSIIKDGLDICLTGFFVKDYLVQQYMDFTVAVYDDELCIYV 300
             :...|:.|| |.:.|:|::||.||.::....|:.|:...:.... :..:|||....|..:.:.:
Zfish   487 EIYVAPDHKY-GSQQADGTWNGLIGELVFKRADVGLSALTITPER-ESVVDFTTRYMDYSVGVLL 549

  Fly   301 PKASRIPQSILPIFAVGYDIWLGFVLTAFACALIWLTLRVINLKLRIVSLGNQHIVGQALGIMVD 365
            .||.|                   .:..|||      |...:|.|.....|...:||..:.::  
Zfish   550 RKAER-------------------TVDMFAC------LAPFDLSLWACIAGTVLLVGTLVYLL-- 587

  Fly   366 TWVVWVRLNLSHLP-----------------------------ASYAERMFIGTLCLVSVIFGAI 401
            .|     ||...||                             .:.|.||.:|...|.::|..:.
Zfish   588 NW-----LNPPRLPMGSVSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVISS 647

  Fly   402 FESSLATVYIHPLYYKDI-NTMQELDESGLKVVYKYSSMADDLFFS----------ETSPLFASL 455
            :.::||..    |....| |::|.|.:...:....|.::.|...:.          |..|:::.:
Zfish   648 YTANLAAF----LTISRIENSIQSLQDLAKQTDLPYGTVLDSAVYDQVRSKGMNPFERDPMYSQM 708

  Fly   456 NKKLSWNRDLRAD-VIDEVARFRNKAGVSRYTSLILESSHFTLLRKIWVVPECPKYYTIS----- 514
            .:.:  ||...|: .::|......|....|: :.:.:::   :|..:.:..|....||:|     
Zfish   709 WRMI--NRTGGAENNVEESKEGIRKVKYGRF-AFVWDAA---VLEYVAINDEDCSLYTVSNNVAD 767

  Fly   515 ----YVMPRDSPWEDAVNALLLRFLNAG----LIVKWIQDEKSWVDIKMRSNILEADAESELV-- 569
                ..|...||:.|..:..:|.....|    |.:||      |          ..|:..:|.  
Zfish   768 RGYGMAMQHGSPYRDIFSQRILELQQNGDMDILKLKW------W----------PRDSPCDLYSP 816

  Fly   570 -------RVLTIGDLQLAFYVVIGGNLLAFLGFLAEHFRWKLQKKG 608
                   ..|.|......|:|:..|.:|:.|  :|....|..::||
Zfish   817 VGTRKSGSALDIHSFAGVFFVLAAGVVLSCL--IATVETWWTRRKG 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:473866 19/74 (26%)
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..429 CDD:380614
PBP2_iGluR_delta_2 440..806 CDD:270449 81/434 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.

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