DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir10a and Ir87a

DIOPT Version :9

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_650290.2 Gene:Ir87a / 41654 FlyBaseID:FBgn0038153 Length:796 Species:Drosophila melanogaster


Alignment Length:411 Identity:87/411 - (21%)
Similarity:169/411 - (41%) Gaps:78/411 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 PEFDKETGLLTRVTGVDFLVAQMLRERLNFTMLLQQPEKKYFGERSANGSY-------NGAIGSI 262
            |:.:.::|...:::|:::.:.|.:.|||:.::.:|       ||.|  ..|       :|.|..|
  Fly   397 PDTETQSGGKLKLSGIEYEMVQTIAERLHVSIEMQ-------GENS--NLYHLFQQLIDGEIEMI 452

  Fly   263 IKDGLDICLTGFFVKDYLVQQYMDFTVAVYDDELCIYVPKASRIPQSILPIFAVGYDIWLGFVLT 327
            : .|:|        :|..:.|::..::..:.|||...|.:|.|  :.....|...::...||::.
  Fly   453 V-GGID--------EDPSISQFVSSSIPYHQDELTWCVARAKR--RHGFFNFVATFNADAGFLIG 506

  Fly   328 AF--ACAL-IWLTLRVINLKLRIVSLGNQHIVGQALGIMVDTWVVWVRLNLSHLPAS---YAERM 386
            .|  .|:| :||..||...:||.:: |......:.|||:::          ..:||.   ...|.
  Fly   507 IFVVTCSLVVWLAQRVSGFQLRNLN-GYFPTCLRVLGILLN----------QAIPAQDFPITLRQ 560

  Fly   387 FIGTLCLVSVIFGAIFESSLATVYIHPLYYKDINTMQELDESGLKVVYKYSSMADDLFFSETSPL 451
            ......|:...|...::|.|.:....|.....|:|:||:..:.:.|:   .:.......::...:
  Fly   561 LFALSFLMGFFFSNTYQSFLISTLTTPRSSYQIHTLQEIYSNKMTVM---GTSEHVRHLNKDGEI 622

  Fly   452 FASLNKKLSWNRDLRADVIDEVARFRNKA-GVSR----YTSLILESSHFTLLRKIWVVPECPKYY 511
            |..:.:|.....:| .|.:::.|:..:.| .|||    |...|.....:...|:     |....|
  Fly   623 FKYIREKFQMCYNL-VDCLNDAAQNEHIAVAVSRQHSFYNPRIQRDRLYCFDRR-----ESLYVY 681

  Fly   512 TISYVMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRSNILEADAESELVRV----- 571
            .::.::|:.......:|.::...:.:|.:.||.:      |:.||..|.|     |:.||     
  Fly   682 LVTMLLPKKYHLLHQINPVIQHIIESGHMQKWAR------DLDMRRMIHE-----EITRVREDPF 735

  Fly   572 --LTIGDLQLAFYVVIGGNLL 590
              ||....:.|  :...|.||
  Fly   736 KALTFDQFRGA--IAFSGGLL 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 16/80 (20%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 22/101 (22%)
Lig_chan 319..587 CDD:278489 58/285 (20%)
Ir87aNP_650290.2 Periplasmic_Binding_Protein_Type_2 408..>475 CDD:304360 17/84 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.