DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and Ir62a

DIOPT Version :9

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_001033986.1 Gene:Ir62a / 3885628 FlyBaseID:FBgn0053971 Length:606 Species:Drosophila melanogaster


Alignment Length:633 Identity:125/633 - (19%)
Similarity:209/633 - (33%) Gaps:231/633 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 LDQLLTNRGAAAPIQKASTFFYILADQ---DKDLS-------ADEQLRLEGSCRQLWTQHKVYNR 147
            ||.|  :||...   .:|..||:|...   |||.|       .||:           |.:.|:.|
  Fly    58 LDDL--HRGLMC---NSSNHFYMLPQMTATDKDSSHVHFSSLQDEE-----------TIYLVFAR 106

  Fly   148 FFLTRDGVWIYDPFKRRDSAFGRLVRY-----------------YGSETLDKLLFR--------- 186
            .  ::|.| ||   .:.:.|.||  ||                 |..|.|.||.||         
  Fly   107 D--SKDAV-IY---LQAERARGR--RYTRTMFLLRKQESQKDIKYFFELLWKLQFRSALVVVAAR 163

  Fly   187 ----------------------------------DMAGYPLRIQMFRSVYTRPEFDKETGLLTRV 217
                                              :..||.:|:.:.:.|.....:.........:
  Fly   164 NFYQMDPYPTVRVIRMRRLSSYDPHHVFPPANRKNFRGYRMRLPVQQDVPNTFWYKNRRTKAWEL 228

  Fly   218 TGVDFLVAQMLRERLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDICLTGFFVKDYLVQ 282
            .|:..::...|...||.||.|.:.|        .|||      |::...   .||     |.:|:
  Fly   229 AGLGGILINQLMMHLNVTMDLFRFE--------VNGS------SLLNMA---ALT-----DLIVK 271

  Fly   283 QYMDFTVAVYDD----------------ELCIYVPKASRIPQSILPIFAVGYDIWLGFVLTAFAC 331
            ..::.:..:||.                ..|..:|..:.|.:|:.        ::|.|.||.:.|
  Fly   272 GKVELSPHLYDTLQSNTSVDYSYPTQVAPRCFMIPLDNEISRSLY--------VFLPFSLTMWLC 328

  Fly   332 AL-IWLTLRVINLKLRIVSLGNQHIVGQALGIMVDTWVVWVRLNLSHLPAS----YAE----RMF 387
            .| :.|.:..:.:: |::..|:                .|..|.   :|.:    |..    |.|
  Fly   329 LLFVLLVVHFVYVR-RLIPDGH----------------FWAILG---VPGAGQVRYGNRKPVRRF 373

  Fly   388 IGTLCLVSV-IFGAIFESSLATVYIHPLYYKDINTMQELDESGLKV------VYKYSSMADDLFF 445
            ...|.|..: |.|..:.:.|.:.....|..:..|:::||.....::      ||   ::.|.|..
  Fly   374 STFLILFGIFILGQTYSTKLTSSLTVTLIRRPDNSLEELFLLPYRILVLPTDVY---AIVDSLGH 435

  Fly   446 SET-SPLFASLN------KKLSWNRD-------LRADVIDEVARFRNKAGVSRYTSLILESSHFT 496
            :|. |..|:..:      |::|.:.:       :|....|...||..|                 
  Fly   436 AEQFSTKFSCTDAENFSQKRISMHPEYIYPISTIRWRFFDMQQRFLRK----------------- 483

  Fly   497 LLRKIWVVPECPKYYTISYVMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVD--------- 552
              ::.:....|...:...|.:..||..:||::..||....|||       ...|:|         
  Fly   484 --KRFYFSKICHGSFPYQYQLRVDSHLKDALHRFLLHVQQAGL-------HDLWLDTCYRKAHRM 539

  Fly   553 --IKMRSNILEADAESELVRVLTIGDLQLAFYVVIGGNLLAFLGFLAE 598
              :|..|.:.|.:.:..| |.|.:..|..||.:.:.|.|.:.:.||.|
  Fly   540 GYLKDFSTLAELEEKLRL-RPLALNLLVPAFSLFLCGMLGSGIAFLVE 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 16/73 (22%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 20/105 (19%)
Lig_chan 319..587 CDD:278489 60/308 (19%)
Ir62aNP_001033986.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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