DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir10a and Ir56d

DIOPT Version :9

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_611432.1 Gene:Ir56d / 37252 FlyBaseID:FBgn0034458 Length:632 Species:Drosophila melanogaster


Alignment Length:677 Identity:143/677 - (21%)
Similarity:251/677 - (37%) Gaps:188/677 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NLTRLNGLLVEPTRDLPQLELWLRAG------------SDHQDAENPYVQWFL--LRTEIPLS-- 67
            |:|.||.:.|        ||::.|..            |:..|..|...|.|.  ..|..|::  
  Fly    23 NITLLNNMFV--------LEMFYRITQLYHFKNFIFYISERLDLNNKDSQEFFHNFWTYFPMAPN 79

  Fly    68 -IVTYQEN-----RYWMDDPFGRRNLVLVMSLDQLLTNRGAAAPIQKAS-----------TFFYI 115
             |:|.:.:     ..::..|    :||:|.:       .|...||.:.:           |.|.:
  Fly    80 LIITREHHLGIPMMQFISTP----SLVMVFT-------TGKDDPIMELASHNQQGIHWLKTIFVL 133

  Fly   116 ---LADQDKDLSADEQLRLEGSCRQL--WTQHKVY-NRFFLT-RDGVWIYDPFKRRDSAFGRLVR 173
               |..:|.:.:.:...:.....:.:  |...|.: |.|.:| :|.|:|.||:. ..|...:...
  Fly   134 FPSLQSRDFETNPESLAQFTAEIKDVYDWVWRKQFINTFLITIKDNVFILDPYP-TPSIVNKTGV 197

  Fly   174 YYGSETLDKLLFRDMAGYPLRI-------QMFRSVYTRPEFDKETGLLTRVTGVDFL-------- 223
            :...|...|.. ::|.||.:|.       ::|:|  .||....|...:...:|..||        
  Fly   198 WQAEEFFHKYA-KNMKGYLVRTPILYDMPRVFKS--DRPTNRYEKNFIHGTSGNLFLGFLEFVNA 259

  Fly   224 -----VAQMLRERLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDICLTGFFVKDYLVQQ 283
                 .|.:..:.||.|.||         :..:.|.|...|.|..:      :|..||..|    
  Fly   260 TLMDTSANVTADYLNMTNLL---------DLVSQGVYETLIHSFTE------ITTKFVVSY---- 305

  Fly   284 YMDFTVAVYDDELCIYVPKASRIPQSILPIFAVGYDIW-LGFVLTAFACALIWL--TLRVINLKL 345
              .:.:.:.|  .||.||..::.|.......|:..::| |..:.|.:....|:|  .||..:|..
  Fly   306 --SYPIGIND--CCIMVPYRNQSPADQYMHEALQENVWVLISLFTLYITVAIYLCSPLRPRDLSA 366

  Fly   346 RIVSLGNQHIVGQALGIMVDTWVVWVRLNLSHLPASYAERMFIGTLCLVSVIFGAIFESSLATVY 410
            ..:    |.|.  .|...|.|:::       ..|......::| .|.:..::...::.|.:.:.:
  Fly   367 AFL----QSIC--TLTYSVPTFII-------RTPTLRMRYLYI-LLAIWGIVTSNLYISRMTSYF 417

  Fly   411 IHPLYYKDINTMQELDESGLKV---VYKYSSMADDLFFSETSPL---FASLNKKLSWNRDLRADV 469
            ......:.|||:|::.|:.|::   ..:|..||       .|||   .:.||         :.|:
  Fly   418 TTAPPVRQINTVQDVVEANLRIKMLAIEYERMA-------KSPLQYPESYLN---------QVDL 466

  Fly   470 ID----EVAR--FRNKAGVS----RYTSLILESSHFTLLRK----IWVVPECPKYYTISYVMPRD 520
            :|    ::.|  |....|.:    |:..|.|:..|   |||    :..:.|.|.|:.  :.:.:|
  Fly   467 VDKHMLDLHRDPFNTSFGYTVSSDRWRFLNLQQLH---LRKPIFRLTEICEGPFYHV--FPLHKD 526

  Fly   521 SPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKM-RSNI---------LEADAESELVRVLTIG 575
            |.....:...::....|||:..| :.|..|..:.: |.::         |..|..|.|:|..|: 
  Fly   527 SHMRSVMTEYIMIAQQAGLMNHW-ERETFWEAVHLHRIHVHLFDDEPMALSLDFFSSLLRTWTL- 589

  Fly   576 DLQLAFYVVIGGNLLAFLGFLAEHFRW 602
                       |.:||.|.|.|| .:|
  Fly   590 -----------GLILAGLAFAAE-MKW 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 16/86 (19%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 18/98 (18%)
Lig_chan 319..587 CDD:278489 61/300 (20%)
Ir56dNP_611432.1 ATPase-IIIA_H <312..422 CDD:273731 24/125 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.