DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and Ir48c

DIOPT Version :10

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster


Alignment Length:607 Identity:111/607 - (18%)
Similarity:236/607 - (38%) Gaps:122/607 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QLELWLRAGSDHQD---AENPYVQWFLLRTEIPLSIVTYQENRYWMDDPFGRRNLVLVMSLDQLL 97
            :::::...|:|..|   .:..| |..::...|.....||.      |:|     :::::.|::.|
  Fly    34 KIQIYFGLGNDLYDFSRLDGNY-QKIIISHNISEEFKTYH------DEP-----VLIIIRLERDL 86

  Fly    98 TNRGAAAPIQKASTFFYILADQDKDL----SADEQLRLEGSCRQLW-----TQHKVYNRFFLTRD 153
            ....|...:.::    |:...|..|:    :.:|.|......|:.:     :|..:||    ::.
  Fly    87 NLNLATLDVLRS----YLTDRQYNDILLIDNDEENLNSYVDIRKAYWNAGFSQVLIYN----SQQ 143

  Fly   154 GVWIYDPF---KRRDSAFGRLVRYYGSETLDKLLFRDMAGYPLRIQMFRSVYTRP-----EFDKE 210
            ..|...|:   :.|.::.        .|.::....|::.|||||:    .|...|     :.|:.
  Fly   144 RTWSIKPYPYLQIRPTSL--------KEYIENRNTRNLMGYPLRV----LVTNDPPHCFVDKDEL 196

  Fly   211 TGLLTRVTGVDFLVAQMLRERLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDICLTGFF 275
            .|...|..|....:.::..::||.| ....|.:::....:|:     .:..:..|.:|.| ...|
  Fly   197 PGSPNRYKGSIVTMLKIFADQLNAT-FQANPFREFRRYSTAD-----CVQMVSDDEIDAC-GSIF 254

  Fly   276 VKDYLVQQYMDFTVA----VYDDELCIYVPKASRIPQSILPIFAVGYDIWLGFVLTAFACALIWL 336
            ::.|        |.|    |..:.:.|..|..:.|.:  ...|...:|::            :|:
  Fly   255 IRTY--------TYATSQPVRLNRVVIMAPFGNPIEK--FYYFFRPFDLY------------VWI 297

  Fly   337 TLRVINLKLRIVS--LGNQHI----VGQALGIMVDTWVVWVRLNLSHLPASYAERMFIGTLCLVS 395
            ...:|.:.:.::.  |...|.    |||.|.:.|.|   .:...|| ||.|.:...|:..|.|.:
  Fly   298 GTGIIVVYIAVMGSLLHRWHFKEWNVGQYLLLAVQT---LLNRELS-LPQSSSGSKFMLLLLLFA 358

  Fly   396 V--IFGAIFESSLATVYIHPLYYKDINTMQELDESGLKVVYKYSSMADDLFFSETSPLFASLNKK 458
            :  |...::.:.|:.:....||.:.|..:.:|..:.:.::.:..::..:..:..:..|       
  Fly   359 IGFILSNLYVALLSMMLTTKLYQRPIENLADLKAANVNILLQTHNIRPNSVYGSSEEL------- 416

  Fly   459 LSWNRDLRADVIDEVARFRNKAGVSRYTSLI---------LESSHFTLLRKIWVVPECPKYYTIS 514
                |: |..:::|......:.|:....:.:         |....|...|::..:.....|....
  Fly   417 ----RE-RFLLVEESQHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLRRRRMKKLSNPVGYTWAV 476

  Fly   515 YVMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRSNILE-ADAESELVRVLTIGDLQ 578
            .|:.::...|...|..:.||...||..|.:.|..   ::.:::..|. ...:::.:..|.:.|:.
  Fly   477 QVIKQNWVLEKHYNDHVQRFFETGLQNKLVDDVH---ELAVKAGFLHFFPTQTQTIEPLRLEDIV 538

  Fly   579 LAFYVVIGGNLLAFLGFLAEHF 600
            :|..|:.||:.||.:.||.|.|
  Fly   539 MAAMVLGGGHALAVICFLVELF 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:473866 13/77 (17%)
Ir48cNP_610700.1 HisJ 178..>280 CDD:440596 23/120 (19%)

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