DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and Ir48c

DIOPT Version :9

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster


Alignment Length:607 Identity:111/607 - (18%)
Similarity:236/607 - (38%) Gaps:122/607 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QLELWLRAGSDHQD---AENPYVQWFLLRTEIPLSIVTYQENRYWMDDPFGRRNLVLVMSLDQLL 97
            :::::...|:|..|   .:..| |..::...|.....||.      |:|     :::::.|::.|
  Fly    34 KIQIYFGLGNDLYDFSRLDGNY-QKIIISHNISEEFKTYH------DEP-----VLIIIRLERDL 86

  Fly    98 TNRGAAAPIQKASTFFYILADQDKDL----SADEQLRLEGSCRQLW-----TQHKVYNRFFLTRD 153
            ....|...:.::    |:...|..|:    :.:|.|......|:.:     :|..:||    ::.
  Fly    87 NLNLATLDVLRS----YLTDRQYNDILLIDNDEENLNSYVDIRKAYWNAGFSQVLIYN----SQQ 143

  Fly   154 GVWIYDPF---KRRDSAFGRLVRYYGSETLDKLLFRDMAGYPLRIQMFRSVYTRP-----EFDKE 210
            ..|...|:   :.|.::.        .|.::....|::.|||||:    .|...|     :.|:.
  Fly   144 RTWSIKPYPYLQIRPTSL--------KEYIENRNTRNLMGYPLRV----LVTNDPPHCFVDKDEL 196

  Fly   211 TGLLTRVTGVDFLVAQMLRERLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDICLTGFF 275
            .|...|..|....:.::..::||.| ....|.:::....:|:     .:..:..|.:|.| ...|
  Fly   197 PGSPNRYKGSIVTMLKIFADQLNAT-FQANPFREFRRYSTAD-----CVQMVSDDEIDAC-GSIF 254

  Fly   276 VKDYLVQQYMDFTVA----VYDDELCIYVPKASRIPQSILPIFAVGYDIWLGFVLTAFACALIWL 336
            ::.|        |.|    |..:.:.|..|..:.|.:  ...|...:|::            :|:
  Fly   255 IRTY--------TYATSQPVRLNRVVIMAPFGNPIEK--FYYFFRPFDLY------------VWI 297

  Fly   337 TLRVINLKLRIVS--LGNQHI----VGQALGIMVDTWVVWVRLNLSHLPASYAERMFIGTLCLVS 395
            ...:|.:.:.::.  |...|.    |||.|.:.|.|   .:...|| ||.|.:...|:..|.|.:
  Fly   298 GTGIIVVYIAVMGSLLHRWHFKEWNVGQYLLLAVQT---LLNRELS-LPQSSSGSKFMLLLLLFA 358

  Fly   396 V--IFGAIFESSLATVYIHPLYYKDINTMQELDESGLKVVYKYSSMADDLFFSETSPLFASLNKK 458
            :  |...::.:.|:.:....||.:.|..:.:|..:.:.::.:..::..:..:..:..|       
  Fly   359 IGFILSNLYVALLSMMLTTKLYQRPIENLADLKAANVNILLQTHNIRPNSVYGSSEEL------- 416

  Fly   459 LSWNRDLRADVIDEVARFRNKAGVSRYTSLI---------LESSHFTLLRKIWVVPECPKYYTIS 514
                |: |..:::|......:.|:....:.:         |....|...|::..:.....|....
  Fly   417 ----RE-RFLLVEESQHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLRRRRMKKLSNPVGYTWAV 476

  Fly   515 YVMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRSNILE-ADAESELVRVLTIGDLQ 578
            .|:.::...|...|..:.||...||..|.:.|..   ::.:::..|. ...:::.:..|.:.|:.
  Fly   477 QVIKQNWVLEKHYNDHVQRFFETGLQNKLVDDVH---ELAVKAGFLHFFPTQTQTIEPLRLEDIV 538

  Fly   579 LAFYVVIGGNLLAFLGFLAEHF 600
            :|..|:.||:.||.:.||.|.|
  Fly   539 MAAMVLGGGHALAVICFLVELF 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 13/77 (17%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 21/103 (20%)
Lig_chan 319..587 CDD:278489 48/285 (17%)
Ir48cNP_610700.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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